Package gov.nih.mipav.model.structures
Class Voro.particle_order
- java.lang.Object
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- gov.nih.mipav.model.structures.Voro.particle_order
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- Enclosing class:
- Voro
class Voro.particle_order extends java.lang.Object\brief A class for storing ordering information when particles are added to a container. When particles are added to a container class, they are sorted into an internal computational grid of blocks. The particle_order class provides a mechanism for remembering which block particles were sorted into. The import and put routines in the container class have variants that also take a particle_order class. Each time they are called, they will store the block that the particle was sorted into, plus the position of the particle within the block. The particle_order class can used by the c_loop_order class to specifically loop over the particles that have their information stored within it.
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Field Summary
Fields Modifier and Type Field Description int[]oA pointer to the array holding the ordering.into_indexA pointer to the next position in the ordering array in which to store an entry.intopintsizeThe current memory allocation for the class, set to the number of entries which can be stored.
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Constructor Summary
Constructors Constructor Description particle_order(int init_size)The particle_order constructor allocates memory to store the ordering information.
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description voidadd(int ijk, int q)Adds a record to the order, corresponding to the memory address of where a particle was placed into the container.private voidadd_ordering_memory()Extends the memory available for storing the ordering.voiddelete()The particle_order destructor frees the dynamically allocated memory used to store the ordering information.
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Field Detail
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o
public int[] o
A pointer to the array holding the ordering.
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o_index
public int o_index
A pointer to the next position in the ordering array in which to store an entry.
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op
public int op
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size
public int size
The current memory allocation for the class, set to the number of entries which can be stored.
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Method Detail
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delete
public void delete()
The particle_order destructor frees the dynamically allocated memory used to store the ordering information.
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add
public void add(int ijk, int q)Adds a record to the order, corresponding to the memory address of where a particle was placed into the container. \param[in] ijk the block into which the particle was placed. \param[in] q the position within the block where the particle was placed.
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add_ordering_memory
private void add_ordering_memory()
Extends the memory available for storing the ordering.
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