Package gov.nih.mipav.model.file

Class FileInfoZVI

java.lang.Object

gov.nih.mipav.model.structures.ModelSerialCloneable

gov.nih.mipav.model.file.FileInfoBase

gov.nih.mipav.model.file.FileInfoZVI

All Implemented Interfaces:

java.io.Serializable, java.lang.Cloneable

public class FileInfoZVI
extends FileInfoBase

File info storage container.

See Also:

Serialized Form

Nested Class Summary

Nested classes/interfaces inherited from class gov.nih.mipav.model.file.FileInfoBase

FileInfoBase.AxisOrientation, FileInfoBase.ImageOrientation, FileInfoBase.Modality, FileInfoBase.Unit, FileInfoBase.UnitType

Field Summary

Fields

Modifier and Type	Field	Description
(package private) int	acquisitionBitDepth
(package private) int	amplificationIndex
(package private) int	apotomeAutoShutterUsed
(package private) int	apotomeAveragingCount
(package private) int	apotomeCamFilterHarmonics
(package private) java.lang.String	apotomeCamGenericCameraName
(package private) int	apotomeCamNormalize
(package private) java.lang.String	apotomeCamPhaseAngles
(package private) java.lang.String	apotomeFilterName
(package private) double	apotomeFilterStrength
(package private) int	apotomeFullPhaseShift
(package private) double	apotomeGratingPeriod
(package private) java.lang.String	apotomeGridName
(package private) int	apotomeGridPosition0
(package private) int	apotomeGridPosition1
(package private) int	apotomeGridPosition2
(package private) int	apotomeGridPosition3
(package private) int	apotomeGridPositionChannel0
(package private) int	apotomeGridPositionChannel1
(package private) int	apotomeGridPositionChannel2
(package private) int	apotomeGridPositionChannel3
(package private) int	apotomeProcessingMode
(package private) int	axioCamAnalogGainEnable
(package private) int	axioCamBlackReference
(package private) int	axioCamColorModel
(package private) int	axioCamDelayTime
(package private) int	axioCamEnhanceColor
(package private) int	axioCamMicroScanning
(package private) int	axioCamNIRMode
(package private) int	axioCamResolution
(package private) double	axioCamSaturation
(package private) int	axioCamSelector
(package private) int	axioCamShutterControl
(package private) int	axioCamShutterSignal
(package private) int	axioCamType
(package private) double	blackValue0
(package private) double	blackValue1
(package private) double	blackValue2
(package private) double	blackValue3
(package private) java.lang.String	camera
(package private) double	cameraAdapterMagnification
(package private) int	cameraBinning
(package private) int	cameraBitDepth
(package private) int	cameraFrameHeight
(package private) int	cameraFrameImageOrientation
(package private) double	cameraFramePixelDistance
(package private) double	cameraFrameScalingFactor
(package private) int	cameraFrameStartLeft
(package private) int	cameraFrameStartTop
(package private) int	cameraFrameWidth
(package private) java.lang.String	cameraImageAcquisitionTime0
(package private) java.lang.String	cameraImageAcquisitionTime1
(package private) java.lang.String	cameraImageAcquisitionTime2
(package private) java.lang.String	cameraImageAcquisitionTime3
(package private) double	cameraLiveScalingFactor
(package private) int	cameraShadingCorrection
(package private) int	cameraShutterLiveEnable
(package private) int	channel0
(package private) int	channel1
(package private) int	channel2
(package private) int	channel3
(package private) java.lang.String	channelName0
(package private) java.lang.String	channelName1
(package private) java.lang.String	channelName2
(package private) java.lang.String	channelName3
(package private) int	channelNameChannel0
(package private) int	channelNameChannel1
(package private) int	channelNameChannel2
(package private) int	channelNameChannel3
(package private) java.lang.String	comments
(package private) int	condenserContrast
(package private) double	condenserNumericalAperture
(package private) int	contrastManagerMode
(package private) java.lang.String	dazzleProtection
(package private) java.lang.String	deviceScalingName
(package private) java.lang.String	documentSubtype
(package private) java.lang.String	documentType
(package private) int	emissionWavelength0
(package private) int	emissionWavelength1
(package private) int	emissionWavelength2
(package private) int	emissionWavelength3
(package private) int	emissionWavelengthChannel0
(package private) int	emissionWavelengthChannel1
(package private) int	emissionWavelengthChannel2
(package private) int	emissionWavelengthChannel3
(package private) int	excitationWavelength0
(package private) int	excitationWavelength1
(package private) int	excitationWavelength2
(package private) int	excitationWavelength3
(package private) int	excitationWavelengthChannel0
(package private) int	excitationWavelengthChannel1
(package private) int	excitationWavelengthChannel2
(package private) int	excitationWavelengthChannel3
(package private) double	exposureTime0
(package private) double	exposureTime1
(package private) double	exposureTime2
(package private) double	exposureTime3
(package private) int	exposureTimeChannel0
(package private) int	exposureTimeChannel1
(package private) int	exposureTimeChannel2
(package private) int	exposureTimeChannel3
(package private) int	externalShutter1
(package private) java.lang.String	fileDate
(package private) java.lang.String	fileID
(package private) java.lang.String	fileLink
(package private) int	fileSize
(package private) java.lang.String	focusCalibrated
(package private) double	focusDepth
(package private) double	focusPosition
(package private) double	gammaValue
(package private) java.lang.String	IDTagFileName
(package private) double	imageMemoryUsage
(package private) java.lang.String	imageRelativeTime0
(package private) java.lang.String	imageRelativeTime1
(package private) java.lang.String	imageRelativeTime2
(package private) java.lang.String	imageRelativeTime3
(package private) java.lang.String	lastModifiedBy
(package private) java.lang.String	lightManagerEnabled
(package private) int	lightManagerMode
(package private) int	microscopeIllumination
(package private) double	microscopeMagnification
(package private) java.lang.String	microscopeName
(package private) int	microscopePort
(package private) int	microscopeType
(package private) int	multichannelColor0
(package private) int	multichannelColor1
(package private) int	multichannelColor2
(package private) int	multichannelColor3
(package private) int	multichannelColorChannel0
(package private) int	multichannelColorChannel1
(package private) int	multichannelColorChannel2
(package private) int	multichannelColorChannel3
(package private) double	multichannelWeight
(package private) int	objectiveContrastMethod
(package private) java.lang.String	objectiveID
(package private) java.lang.String	objectiveImmersionType
(package private) double	objectiveMagnification
(package private) double	objectiveNA
(package private) java.lang.String	objectiveName
(package private) int	objectiveTurretPosition
(package private) double	objectiveWorkingDistance
(package private) int	objectType
(package private) double	ocularTotalMagnification
(package private) double	optovar
(package private) double	originalStagePositionX
(package private) double	originalStagePositionY
(package private) java.lang.String	parfocalCorrection
(package private) java.lang.String	reference
(package private) int	reflectedLightHalogenLampMode
(package private) double	reflectedLightHalogenLampVoltage
(package private) int	reflectedLightShutter
(package private) java.lang.String	reflector
(package private) java.lang.String	reflectorID
(package private) double	reflectorMagnification
(package private) int	reflectorPosition0
(package private) int	reflectorPosition1
(package private) int	reflectorPosition2
(package private) int	reflectorPosition3
(package private) int	reflectorPositionChannel0
(package private) int	reflectorPositionChannel1
(package private) int	reflectorPositionChannel2
(package private) int	reflectorPositionChannel3
(package private) double	relFocusPosition1
(package private) double	relFocusPosition2
(package private) double	scaleHeight
(package private) double	scaleWidth
(package private) java.lang.String	stageCalibrated
(package private) double	stagePositionX
(package private) double	stagePositionY
(package private) java.lang.String	title
(package private) int	transmittedLightHalogenLampMode
(package private) double	transmittedLightHalogenLampVoltage
(package private) int	transmittedLightShutter
(package private) java.lang.String	userAddress
(package private) java.lang.String	userCity
(package private) java.lang.String	userCompany
(package private) java.lang.String	userCompanyLogo
(package private) java.lang.String	userCountry
(package private) java.lang.String	userFax
(package private) java.lang.String	userID
(package private) java.lang.String	userName
(package private) java.lang.String	userPhone
(package private) int	validBitsPerPixel
(package private) double	whiteValue0
(package private) double	whiteValue1
(package private) double	whiteValue2
(package private) double	whiteValue3

Fields inherited from class gov.nih.mipav.model.file.FileInfoBase

ANGSTROMS, ANGSTROMS_STRING, AXIAL, axisOrientation, axisOrientationStr, BIOMAGNETIC_IMAGING, cameraMake, cameraModel, CENTIMETERS, CENTIMETERS_STRING, COLOR_FLOW_DOPPLER, COMPRESSION_BZIP2, COMPRESSION_GZIP, COMPRESSION_NONE, COMPRESSION_ZIP, COMPUTED_RADIOGRAPHY, COMPUTED_TOMOGRAPHY, conversionSpaceTimeUnits, CORONAL, DEGREES, DEGREES_STRING, DIAPHANOGRAPHY, DIGITAL_RADIOGRAPHY, DUPLEX_DOPPLER, ENDOSCOPY, exposureTime, EXTERNAL_CAMERA_PHOTOGRAPHY, FA, fileName, fileSuffix, FNumber, focalLength, focalLength35, GENERAL_MICROSCOPY, HARDCOPY, HOURS, HOURS_STRING, HZ, HZ_STRING, ICG, imageOrientation, INCHES, INCHES_STRING, INTRAORAL_RADIOGRAPHY, ISOSpeedRating, KILOMETERS, KILOMETERS_STRING, LASER_SURFACE_SCAN, MAGNETIC_RESONANCE, MAGNETIC_RESONANCE_ANGIOGRAPHY, MAGNETIC_RESONANCE_SPECTROSCOPY, MAMMOGRAPHY, METERS, METERS_STRING, MICROMETERS, MICROMETERS_STRING, MICROSEC, MICROSEC_STRING, MILES, MILES_STRING, MILLIMETERS, MILLIMETERS_STRING, MILLISEC, MILLISEC_STRING, MILS, MILS_STRING, MINUTES, MINUTES_STRING, modality, NANOMETERS, NANOMETERS_STRING, NANOSEC, NANOSEC_STRING, NUCLEAR_MEDICINE, ORI_A2P_TYPE, ORI_I2S_TYPE, ORI_L2R_TYPE, ORI_P2A_TYPE, ORI_R2L_TYPE, ORI_S2I_TYPE, ORI_UNKNOWN_TYPE, origin, OTHER, PANORAMIC_XRAY, POSITRON_EMISSION_TOMOGRAPHY, PPM, PPM_STRING, RADIO_FLUOROSCOPY, RADIOGRAPHIC_IMAGING, RADIOTHERAPY_DOSE, RADIOTHERAPY_IMAGE, RADIOTHERAPY_PLAN, RADIOTHERAPY_RECORD, RADIOTHERAPY_STRUCTURE_SET, RADS, RADS_STRING, RED_FREE, SAGITTAL, SECONDS, SECONDS_STRING, SINGLE_PHOTON_EMISSION_COMPUTED_TOMOGRAPHY, SLIDE_MICROSCOPY, sUnits, tagDescription, tagName, THERMOGRAPHY, TRANSFORM_ANOTHER_DATASET, TRANSFORM_MNI_152, TRANSFORM_SCANNER_ANATOMICAL, TRANSFORM_TALAIRACH_TOURNOUX, TRANSFORM_UNKNOWN, tUnits, ULTRASOUND, unitsOfMeasure, UNKNOWN_MEASURE, UNKNOWN_MODALITY, UNKNOWN_ORIENT, UNKNOWN_STRING, XRAY_ANGIOGRAPHY

Constructor Summary

Constructors

Constructor	Description
FileInfoZVI(java.lang.String name, java.lang.String directory, int format)	File info storage constructor.

Method Summary

Modifier and Type	Method	Description
void	displayAboutInfo(JDialogBase dlog, TransMatrix matrix)	Displays the file information.
void	setAcquisitionBitDepth(int acquisitionBitDepth)
void	setAmplificationIndex(int amplificationIndex)
void	setApotomeAutoShutterUsed(int apotomeAutoShutterUsed)
void	setApotomeAveragingCount(int apotomeAveragingCount)
void	setApotomeCamFilterHarmonics(int apotomeCamFilterHarmonics)
void	setApotomeCamGenericCameraName(java.lang.String apotomeCamGenericCameraName)
void	setApotomeCamNormalize(int apotomeCamNormalize)
void	setApotomeCamPhaseAngles(java.lang.String apotomeCamPhaseAngles)
void	setApotomeFilterName(java.lang.String apotomeFilterName)
void	setApotomeFilterStrength(double apotomeFilterStrength)
void	setApotomeFullPhaseShift(int apotomeFullPhaseShift)
void	setApotomeGratingPeriod(double apotomeGratingPeriod)
void	setApotomeGridName(java.lang.String apotomeGridName)
void	setApotomeGridPosition0(int apotomeGridPositionChannel0, int apotomeGridPosition0)
void	setApotomeGridPosition1(int apotomeGridPositionChannel1, int apotomeGridPosition1)
void	setApotomeGridPosition2(int apotomeGridPositionChannel2, int apotomeGridPosition2)
void	setApotomeGridPosition3(int apotomeGridPositionChannel3, int apotomeGridPosition3)
void	setApotomeProcessingMode(int apotomeProcessingMode)
void	setAxioCamAnalogGainEnable(int axioCamAnalogGainEnable)
void	setAxioCamBlackReference(int axioCamBlackReference)
void	setAxioCamColorModel(int axioCamColorModel)
void	setAxioCamDelayTime(int axioCamDelayTime)
void	setAxioCamEnhanceColor(int axioCamEnhanceColor)
void	setAxioCamMicroScanning(int axioCamMicroScanning)
void	setAxioCamNIRMode(int axioCamNIRMode)
void	setAxioCamResolution(int axioCamResolution)
void	setAxioCamSaturation(double axioCamSaturation)
void	setAxioCamSelector(int axioCamSelector)
void	setAxioCamShutterControl(int axioCamShutterControl)
void	setAxioCamShutterSignal(int axioCamShutterSignal)
void	setAxioCamType(int axioCamType)
void	setBlackValue0(double blackValue0)
void	setBlackValue1(double blackValue1)
void	setBlackValue2(double blackValue2)
void	setBlackValue3(double blackValue3)
void	setCamera(java.lang.String camera)
void	setCameraAdapterMagnification(double cameraAdapterMagnification)
void	setCameraBinning(int cameraBinning)
void	setCameraBitDepth(int cameraBitDepth)
void	setCameraFrameHeight(int cameraFrameHeight)
void	setCameraFrameImageOrientation(int cameraFrameImageOrientation)
void	setCameraFramePixelDistance(double cameraFramePixelDistance)
void	setCameraFrameScalingFactor(double cameraFrameScalingFactor)
void	setCameraFrameStartLeft(int cameraFrameStartLeft)
void	setCameraFrameStartTop(int cameraFrameStartTop)
void	setCameraFrameWidth(int cameraFrameWidth)
void	setCameraImageAcquisitionTime0(java.lang.String cameraImageAcquisitionTime0)
void	setCameraImageAcquisitionTime1(java.lang.String cameraImageAcquisitionTime1)
void	setCameraImageAcquisitionTime2(java.lang.String cameraImageAcquisitionTime2)
void	setCameraImageAcquisitionTime3(java.lang.String cameraImageAcquisitionTime3)
void	setCameraLiveScalingFactor(double cameraLiveScalingFactor)
void	setCameraShadingCorrection(int cameraShadingCorrection)
void	setCameraShutterLiveEnable(int cameraShutterLiveEnable)
void	setChannel0(int channel0)
void	setChannel1(int channel1)
void	setChannel2(int channel2)
void	setChannel3(int channel3)
void	setChannelName0(int channelNameChannel0, java.lang.String channelName0)
void	setChannelName1(int channelNameChannel1, java.lang.String channelName1)
void	setChannelName2(int channelNameChannel2, java.lang.String channelName2)
void	setChannelName3(int channelNameChannel3, java.lang.String channelName3)
void	setComments(java.lang.String comments)
void	setCondenserContrast(int condenserContrast)
void	setCondenserNumericalAperture(double condenserNumericalAperture)
void	setContrastManagerMode(int contrastManagerMode)
void	setDazzleProtection(java.lang.String dazzleProtection)
void	setDeviceScalingName(java.lang.String deviceScalingName)
void	setDocumentSubtype(java.lang.String documentSubtype)
void	setDocumentType(java.lang.String documentType)
void	setEmissionWavelength0(int emissionWavelengthChannel0, int emissionWavelength0)
void	setEmissionWavelength1(int emissionWavelengthChannel1, int emissionWavelength1)
void	setEmissionWavelength2(int emissionWavelengthChannel2, int emissionWavelength2)
void	setEmissionWavelength3(int emissionWavelengthChannel3, int emissionWavelength3)
void	setExcitationWavelength0(int excitationWavelengthChannel0, int excitationWavelength0)
void	setExcitationWavelength1(int excitationWavelengthChannel1, int excitationWavelength1)
void	setExcitationWavelength2(int excitationWavelengthChannel2, int excitationWavelength2)
void	setExcitationWavelength3(int excitationWavelengthChannel3, int excitationWavelength3)
void	setExposureTime0(int exposureTimeChannel0, double exposureTime0)
void	setExposureTime1(int exposureTimeChannel1, double exposureTime1)
void	setExposureTime2(int exposureTimeChannel2, double exposureTime2)
void	setExposureTime3(int exposureTimeChannel3, double exposureTime3)
void	setExternalShutter1(int externalShutter1)
void	setFileDate(java.lang.String fileDate)
void	setFileID(java.lang.String fileID)
void	setFileLink(java.lang.String fileLink)
void	setFilename(java.lang.String IDTagFileName)
void	setFileSize(int fileSize)
void	setFocusCalibrated(java.lang.String focusCalibrated)
void	setFocusDepth(double focusDepth)
void	setFocusPosition(double focusPosition)
void	setGammaValue(double gammaValue)
void	setImageMemoryUsage(double imageMemoryUsage)
void	setImageRelativeTime0(java.lang.String imageRelativeTime0)
void	setImageRelativeTime1(java.lang.String imageRelativeTime1)
void	setImageRelativeTime2(java.lang.String imageRelativeTime2)
void	setImageRelativeTime3(java.lang.String imageRelativeTime3)
void	setLastModifiedBy(java.lang.String lastModifiedBy)
void	setLightManagerEnabled(java.lang.String lightManagerEnabled)
void	setLightManagerMode(int lightManagerMode)
void	setMicroscopeIllumination(int microscopeIllumination)
void	setMicroscopeMagnification(double microscopeMagnification)
void	setMicroscopeName(java.lang.String microscopeName)
void	setMicroscopePort(int microscopePort)
void	setMicroscopeType(int microscopeType)
void	setMultichannelColor0(int multichannelColorChannel0, int multichannelColor0)
void	setMultichannelColor1(int multichannelColorChannel1, int multichannelColor1)
void	setMultichannelColor2(int multichannelColorChannel2, int multichannelColor2)
void	setMultichannelColor3(int multichannelColorChannel3, int multichannelColor3)
void	setMultichannelWeight(double multichannelWeight)
void	setObjectiveContrastMethod(int objectiveContrastMethod)
void	setObjectiveID(java.lang.String objectiveID)
void	setObjectiveImmersionType(java.lang.String objectiveImmersionType)
void	setObjectiveMagnification(double objectiveMagnification)
void	setObjectiveNA(double objectiveNA)
void	setObjectiveName(java.lang.String objectiveName)
void	setObjectiveTurretPosition(int objectiveTurretPosition)
void	setObjectiveWorkingDistance(double objectiveWorkingDistance)
void	setObjectType(int objectType)
void	setOcularTotalMagnification(double ocularTotalMagnification)
void	setOptovar(double optovar)
void	setOriginalStagePositionX(double originalStagePositionX)
void	setOriginalStagePositionY(double originalStagePositionY)
void	setParfocalCorrection(java.lang.String parfocalCorrection)
void	setReference(java.lang.String reference)
void	setReflectedLightHalogenLampMode(int reflectedLightHalogenLampMode)
void	setReflectedLightHalogenLampVoltage(double reflectedLightHalogenLampVoltage)
void	setReflectedLightShutter(int reflectedLightShutter)
void	setReflector(java.lang.String reflector)
void	setReflectorID(java.lang.String reflectorID)
void	setReflectorMagnification(double reflectorMagnification)
void	setReflectorPosition0(int reflectorPositionChannel0, int reflectorPosition0)
void	setReflectorPosition1(int reflectorPositionChannel1, int reflectorPosition1)
void	setReflectorPosition2(int reflectorPositionChannel2, int reflectorPosition2)
void	setReflectorPosition3(int reflectorPositionChannel3, int reflectorPosition3)
void	setRelFocusPosition1(double relFocusPosition1)
void	setRelFocusPosition2(double relFocusPosition2)
void	setScaleHeight(double scaleHeight)
void	setScaleWidth(double scaleWidth)
void	setStageCalibrated(java.lang.String stageCalibrated)
void	setStagePositionX(double stagePositionX)
void	setStagePositionY(double stagePositionY)
void	setTitle(java.lang.String title)
void	setTransmittedLightHalogenLampMode(int transmittedLightHalogenLampMode)
void	setTransmittedLightHalogenLampVoltage(double transmittedLightHalogenLampVoltage)
void	setTransmittedLightShutter(int transmittedLightShutter)
void	setUserAddress(java.lang.String userAddress)
void	setUserCity(java.lang.String userCity)
void	setUserCompany(java.lang.String userCompany)
void	setUserCompanyLogo(java.lang.String userCompanyLogo)
void	setUserCountry(java.lang.String userCountry)
void	setUserFax(java.lang.String userFax)
void	setUserID(java.lang.String userID)
void	setUserName(java.lang.String userName)
void	setUserPhone(java.lang.String userPhone)
void	setValidBitsPerPixel(int validBitsPerPixel)
void	setWhiteValue0(double whiteValue0)
void	setWhiteValue1(double whiteValue1)
void	setWhiteValue2(double whiteValue2)
void	setWhiteValue3(double whiteValue3)

Methods inherited from class gov.nih.mipav.model.file.FileInfoBase

copyCoreInfo, copyCoreInfo, displayAboutInfo, displayPrimaryInfo, finalize, getAboutInfo, getAllSameDimUnits, getAreaUnitsOfMeasureStr, getAxisDirection, getAxisOrientation, getAxisOrientation, getAxisOrientationFromStr, getAxisOrientationStr, getCameraMake, getCameraModel, getCompressionType, getDataType, getDataTypeFromStr, getEndianess, getEndianessFromStr, getExposureTime, getExtents, getFileDirectory, getFileFormat, getFileName, getFileSuffix, getFNumber, getFocalLength, getFocalLength35, getImageOrientation, getImageOrientationFromStr, getImageOrientationStr, getIs2_5D, getISOSpeedRating, getLPSOrigin, getLUT, getMax, getMaxB, getMaxG, getMaxR, getMin, getMinB, getMinG, getMinR, getModality, getModalityFromStr, getModalityStr, getModalityStr, getMultiFile, getNumOfBytesPerPixel, getOffset, getOrigin, getOrigin, getOriginalEndianess, getOriginAtSlice, getPhotometric, getPixelPadValue, getPrimaryInfo, getRescaleIntercept, getRescaleSlope, getResolution, getResolutions, getSize, getSliceThickness, getUnitsOfMeasure, getUnitsOfMeasure, getUnitsOfMeasureAbbrevStr, getUnitsOfMeasureAbbrevStr, getUnitsOfMeasureFromStr, getUnitsOfMeasureStr, getUnitsOfMeasureStr, getVolumeUnitsOfMeasureStr, isDicomOrdered, oppositeOrient, sameAxis, setAxisOrientation, setAxisOrientation, setCameraMake, setCameraModel, setCompressionType, setDataType, setEndianess, setExposureTime, setExtents, setExtents, setFileDirectory, setFileFormat, setFileName, setFileSuffix, setFNumber, setFocalLength, setFocalLength35, setImageOrientation, setISOSpeedRating, setLUT, setMax, setMaxB, setMaxG, setMaxR, setMin, setMinB, setMinG, setMinR, setModality, setMultiFile, setOffset, setOrigin, setOrigin, setOriginalEndianess, setPhotometric, setPixelPadValue, setRescaleIntercept, setRescaleSlope, setResolutions, setResolutions, setSliceThickness, setTagDescription, setTagName, setUnitsOfMeasure, setUnitsOfMeasure, setUnitsOfMeasure, setUnitsOfMeasure, toString

Methods inherited from class gov.nih.mipav.model.structures.ModelSerialCloneable

clone, nativeClone

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

blackValue0

double blackValue0

blackValue1

double blackValue1

blackValue2

double blackValue2

blackValue3

double blackValue3

whiteValue0

double whiteValue0

whiteValue1

double whiteValue1

whiteValue2

double whiteValue2

whiteValue3

double whiteValue3

gammaValue

double gammaValue

acquisitionBitDepth

int acquisitionBitDepth

validBitsPerPixel

int validBitsPerPixel

cameraFrameScalingFactor

double cameraFrameScalingFactor

cameraLiveScalingFactor

double cameraLiveScalingFactor

cameraFramePixelDistance

double cameraFramePixelDistance

channelName0

java.lang.String channelName0

channelName1

java.lang.String channelName1

channelName2

java.lang.String channelName2

channelName3

java.lang.String channelName3

channelNameChannel0

int channelNameChannel0

channelNameChannel1

int channelNameChannel1

channelNameChannel2

int channelNameChannel2

channelNameChannel3

int channelNameChannel3

exposureTime0

double exposureTime0

exposureTime1

double exposureTime1

exposureTime2

double exposureTime2

exposureTime3

double exposureTime3

exposureTimeChannel0

int exposureTimeChannel0

exposureTimeChannel1

int exposureTimeChannel1

exposureTimeChannel2

int exposureTimeChannel2

exposureTimeChannel3

int exposureTimeChannel3

apotomeProcessingMode

int apotomeProcessingMode

apotomeGridPosition0

int apotomeGridPosition0

apotomeGridPosition1

int apotomeGridPosition1

apotomeGridPosition2

int apotomeGridPosition2

apotomeGridPosition3

int apotomeGridPosition3

apotomeGridPositionChannel0

int apotomeGridPositionChannel0

apotomeGridPositionChannel1

int apotomeGridPositionChannel1

apotomeGridPositionChannel2

int apotomeGridPositionChannel2

apotomeGridPositionChannel3

int apotomeGridPositionChannel3

apotomeFullPhaseShift

int apotomeFullPhaseShift

apotomeFilterStrength

double apotomeFilterStrength

apotomeCamFilterHarmonics

int apotomeCamFilterHarmonics

apotomeGratingPeriod

double apotomeGratingPeriod

apotomeCamNormalize

int apotomeCamNormalize

apotomeAveragingCount

int apotomeAveragingCount

microscopeType

int microscopeType

microscopeIllumination

int microscopeIllumination

focusDepth

double focusDepth

cameraAdapterMagnification

double cameraAdapterMagnification

microscopePort

int microscopePort

ocularTotalMagnification

double ocularTotalMagnification

objectiveTurretPosition

int objectiveTurretPosition

objectiveMagnification

double objectiveMagnification

objectiveNA

double objectiveNA

objectiveContrastMethod

int objectiveContrastMethod

objectiveImmersionType

java.lang.String objectiveImmersionType

objectiveWorkingDistance

double objectiveWorkingDistance

focusPosition

double focusPosition

relFocusPosition1

double relFocusPosition1

relFocusPosition2

double relFocusPosition2

focusCalibrated

java.lang.String focusCalibrated

lightManagerEnabled

java.lang.String lightManagerEnabled

lightManagerMode

int lightManagerMode

parfocalCorrection

java.lang.String parfocalCorrection

dazzleProtection

java.lang.String dazzleProtection

contrastManagerMode

int contrastManagerMode

reflectorPosition0

int reflectorPosition0

reflectorPosition1

int reflectorPosition1

reflectorPosition2

int reflectorPosition2

reflectorPosition3

int reflectorPosition3

reflectorPositionChannel0

int reflectorPositionChannel0

reflectorPositionChannel1

int reflectorPositionChannel1

reflectorPositionChannel2

int reflectorPositionChannel2

reflectorPositionChannel3

int reflectorPositionChannel3

reflectorMagnification

double reflectorMagnification

transmittedLightShutter

int transmittedLightShutter

reflectedLightShutter

int reflectedLightShutter

transmittedLightHalogenLampVoltage

double transmittedLightHalogenLampVoltage

transmittedLightHalogenLampMode

int transmittedLightHalogenLampMode

multichannelColor0

int multichannelColor0

multichannelColor1

int multichannelColor1

multichannelColor2

int multichannelColor2

multichannelColor3

int multichannelColor3

multichannelColorChannel0

int multichannelColorChannel0

multichannelColorChannel1

int multichannelColorChannel1

multichannelColorChannel2

int multichannelColorChannel2

multichannelColorChannel3

int multichannelColorChannel3

multichannelWeight

double multichannelWeight

stagePositionX

double stagePositionX

stagePositionY

double stagePositionY

originalStagePositionX

double originalStagePositionX

originalStagePositionY

double originalStagePositionY

scaleWidth

double scaleWidth

scaleHeight

double scaleHeight

cameraFrameStartLeft

int cameraFrameStartLeft

cameraFrameStartTop

int cameraFrameStartTop

cameraFrameWidth

int cameraFrameWidth

cameraFrameHeight

int cameraFrameHeight

cameraFrameImageOrientation

int cameraFrameImageOrientation

cameraBinning

int cameraBinning

axioCamSelector

int axioCamSelector

axioCamType

int axioCamType

axioCamResolution

int axioCamResolution

axioCamColorModel

int axioCamColorModel

axioCamMicroScanning

int axioCamMicroScanning

amplificationIndex

int amplificationIndex

axioCamBlackReference

int axioCamBlackReference

cameraShadingCorrection

int cameraShadingCorrection

axioCamEnhanceColor

int axioCamEnhanceColor

axioCamNIRMode

int axioCamNIRMode

axioCamShutterControl

int axioCamShutterControl

axioCamShutterSignal

int axioCamShutterSignal

axioCamDelayTime

int axioCamDelayTime

microscopeMagnification

double microscopeMagnification

reflectedLightHalogenLampVoltage

double reflectedLightHalogenLampVoltage

reflectedLightHalogenLampMode

int reflectedLightHalogenLampMode

apotomeAutoShutterUsed

int apotomeAutoShutterUsed

objectType

int objectType

imageMemoryUsage

double imageMemoryUsage

excitationWavelength0

int excitationWavelength0

excitationWavelength1

int excitationWavelength1

excitationWavelength2

int excitationWavelength2

excitationWavelength3

int excitationWavelength3

excitationWavelengthChannel0

int excitationWavelengthChannel0

excitationWavelengthChannel1

int excitationWavelengthChannel1

excitationWavelengthChannel2

int excitationWavelengthChannel2

excitationWavelengthChannel3

int excitationWavelengthChannel3

emissionWavelength0

int emissionWavelength0

emissionWavelength1

int emissionWavelength1

emissionWavelength2

int emissionWavelength2

emissionWavelength3

int emissionWavelength3

emissionWavelengthChannel0

int emissionWavelengthChannel0

emissionWavelengthChannel1

int emissionWavelengthChannel1

emissionWavelengthChannel2

int emissionWavelengthChannel2

emissionWavelengthChannel3

int emissionWavelengthChannel3

cameraImageAcquisitionTime0

java.lang.String cameraImageAcquisitionTime0

cameraImageAcquisitionTime1

java.lang.String cameraImageAcquisitionTime1

cameraImageAcquisitionTime2

java.lang.String cameraImageAcquisitionTime2

cameraImageAcquisitionTime3

java.lang.String cameraImageAcquisitionTime3

imageRelativeTime0

java.lang.String imageRelativeTime0

imageRelativeTime1

java.lang.String imageRelativeTime1

imageRelativeTime2

java.lang.String imageRelativeTime2

imageRelativeTime3

java.lang.String imageRelativeTime3

fileDate

java.lang.String fileDate

fileSize

int fileSize

channel0

int channel0

channel1

int channel1

channel2

int channel2

channel3

int channel3

axioCamAnalogGainEnable

int axioCamAnalogGainEnable

cameraShutterLiveEnable

int cameraShutterLiveEnable

axioCamSaturation

double axioCamSaturation

condenserContrast

int condenserContrast

condenserNumericalAperture

double condenserNumericalAperture

stageCalibrated

java.lang.String stageCalibrated

optovar

double optovar

cameraBitDepth

int cameraBitDepth

externalShutter1

int externalShutter1

documentType

java.lang.String documentType

IDTagFileName

java.lang.String IDTagFileName

userID

java.lang.String userID

userName

java.lang.String userName

userCity

java.lang.String userCity

userAddress

java.lang.String userAddress

userPhone

java.lang.String userPhone

userFax

java.lang.String userFax

userCountry

java.lang.String userCountry

userCompany

java.lang.String userCompany

userCompanyLogo

java.lang.String userCompanyLogo

deviceScalingName

java.lang.String deviceScalingName

camera

java.lang.String camera

microscopeName

java.lang.String microscopeName

objectiveID

java.lang.String objectiveID

objectiveName

java.lang.String objectiveName

reflectorID

java.lang.String reflectorID

reflector

java.lang.String reflector

reference

java.lang.String reference

fileLink

java.lang.String fileLink

fileID

java.lang.String fileID

lastModifiedBy

java.lang.String lastModifiedBy

title

java.lang.String title

apotomeGridName

java.lang.String apotomeGridName

apotomeFilterName

java.lang.String apotomeFilterName

apotomeCamPhaseAngles

java.lang.String apotomeCamPhaseAngles

apotomeCamGenericCameraName

java.lang.String apotomeCamGenericCameraName

documentSubtype

java.lang.String documentSubtype

comments

java.lang.String comments

Constructor Detail

FileInfoZVI

public FileInfoZVI(java.lang.String name,
                   java.lang.String directory,
                   int format)

File info storage constructor.

Parameters:

name - file name

directory - directory

format - file format

Method Detail

displayAboutInfo

public void displayAboutInfo(JDialogBase dlog,
                             TransMatrix matrix)

Displays the file information.

Specified by:

displayAboutInfo in class FileInfoBase

Parameters:

dlog - dialog box that is written to

matrix - transformation matrix

setAcquisitionBitDepth

public void setAcquisitionBitDepth(int acquisitionBitDepth)

setValidBitsPerPixel

public void setValidBitsPerPixel(int validBitsPerPixel)

setBlackValue0

public void setBlackValue0(double blackValue0)

setBlackValue1

public void setBlackValue1(double blackValue1)

setBlackValue2

public void setBlackValue2(double blackValue2)

setBlackValue3

public void setBlackValue3(double blackValue3)

setWhiteValue0

public void setWhiteValue0(double whiteValue0)

setWhiteValue1

public void setWhiteValue1(double whiteValue1)

setWhiteValue2

public void setWhiteValue2(double whiteValue2)

setWhiteValue3

public void setWhiteValue3(double whiteValue3)

setGammaValue

public void setGammaValue(double gammaValue)

setCameraFrameScalingFactor

public void setCameraFrameScalingFactor(double cameraFrameScalingFactor)

setCameraLiveScalingFactor

public void setCameraLiveScalingFactor(double cameraLiveScalingFactor)

setCameraFramePixelDistance

public void setCameraFramePixelDistance(double cameraFramePixelDistance)

setExposureTime0

public void setExposureTime0(int exposureTimeChannel0,
                             double exposureTime0)

setExposureTime1

public void setExposureTime1(int exposureTimeChannel1,
                             double exposureTime1)

setExposureTime2

public void setExposureTime2(int exposureTimeChannel2,
                             double exposureTime2)

setExposureTime3

public void setExposureTime3(int exposureTimeChannel3,
                             double exposureTime3)

setApotomeProcessingMode

public void setApotomeProcessingMode(int apotomeProcessingMode)

setApotomeGridPosition0

public void setApotomeGridPosition0(int apotomeGridPositionChannel0,
                                    int apotomeGridPosition0)

setApotomeGridPosition1

public void setApotomeGridPosition1(int apotomeGridPositionChannel1,
                                    int apotomeGridPosition1)

setApotomeGridPosition2

public void setApotomeGridPosition2(int apotomeGridPositionChannel2,
                                    int apotomeGridPosition2)

setApotomeGridPosition3

public void setApotomeGridPosition3(int apotomeGridPositionChannel3,
                                    int apotomeGridPosition3)

setApotomeFullPhaseShift

public void setApotomeFullPhaseShift(int apotomeFullPhaseShift)

setApotomeFilterStrength

public void setApotomeFilterStrength(double apotomeFilterStrength)

setApotomeCamFilterHarmonics

public void setApotomeCamFilterHarmonics(int apotomeCamFilterHarmonics)

setApotomeGratingPeriod

public void setApotomeGratingPeriod(double apotomeGratingPeriod)

setApotomeCamNormalize

public void setApotomeCamNormalize(int apotomeCamNormalize)

setApotomeAveragingCount

public void setApotomeAveragingCount(int apotomeAveragingCount)

setMicroscopeType

public void setMicroscopeType(int microscopeType)

setMicroscopeIllumination

public void setMicroscopeIllumination(int microscopeIllumination)

setFocusDepth

public void setFocusDepth(double focusDepth)

setCameraAdapterMagnification

public void setCameraAdapterMagnification(double cameraAdapterMagnification)

setMicroscopePort

public void setMicroscopePort(int microscopePort)

setOcularTotalMagnification

public void setOcularTotalMagnification(double ocularTotalMagnification)

setObjectiveTurretPosition

public void setObjectiveTurretPosition(int objectiveTurretPosition)

setObjectiveMagnification

public void setObjectiveMagnification(double objectiveMagnification)

setObjectiveNA

public void setObjectiveNA(double objectiveNA)

setObjectiveContrastMethod

public void setObjectiveContrastMethod(int objectiveContrastMethod)

setObjectiveImmersionType

public void setObjectiveImmersionType(java.lang.String objectiveImmersionType)

setObjectiveWorkingDistance

public void setObjectiveWorkingDistance(double objectiveWorkingDistance)

setFocusPosition

public void setFocusPosition(double focusPosition)

setFocusCalibrated

public void setFocusCalibrated(java.lang.String focusCalibrated)

setLightManagerEnabled

public void setLightManagerEnabled(java.lang.String lightManagerEnabled)

setLightManagerMode

public void setLightManagerMode(int lightManagerMode)

setParfocalCorrection

public void setParfocalCorrection(java.lang.String parfocalCorrection)

setDazzleProtection

public void setDazzleProtection(java.lang.String dazzleProtection)

setContrastManagerMode

public void setContrastManagerMode(int contrastManagerMode)

setReflectorPosition0

public void setReflectorPosition0(int reflectorPositionChannel0,
                                  int reflectorPosition0)

setReflectorPosition1

public void setReflectorPosition1(int reflectorPositionChannel1,
                                  int reflectorPosition1)

setReflectorPosition2

public void setReflectorPosition2(int reflectorPositionChannel2,
                                  int reflectorPosition2)

setReflectorPosition3

public void setReflectorPosition3(int reflectorPositionChannel3,
                                  int reflectorPosition3)

setReflectorMagnification

public void setReflectorMagnification(double reflectorMagnification)

setTransmittedLightShutter

public void setTransmittedLightShutter(int transmittedLightShutter)

setReflectedLightShutter

public void setReflectedLightShutter(int reflectedLightShutter)

setTransmittedLightHalogenLampVoltage

public void setTransmittedLightHalogenLampVoltage(double transmittedLightHalogenLampVoltage)

setTransmittedLightHalogenLampMode

public void setTransmittedLightHalogenLampMode(int transmittedLightHalogenLampMode)

setMultichannelColor0

public void setMultichannelColor0(int multichannelColorChannel0,
                                  int multichannelColor0)

setMultichannelColor1

public void setMultichannelColor1(int multichannelColorChannel1,
                                  int multichannelColor1)

setMultichannelColor2

public void setMultichannelColor2(int multichannelColorChannel2,
                                  int multichannelColor2)

setMultichannelColor3

public void setMultichannelColor3(int multichannelColorChannel3,
                                  int multichannelColor3)

setMultichannelWeight

public void setMultichannelWeight(double multichannelWeight)

setStagePositionX

public void setStagePositionX(double stagePositionX)

setStagePositionY

public void setStagePositionY(double stagePositionY)

setOriginalStagePositionX

public void setOriginalStagePositionX(double originalStagePositionX)

setOriginalStagePositionY

public void setOriginalStagePositionY(double originalStagePositionY)

setScaleWidth

public void setScaleWidth(double scaleWidth)

setScaleHeight

public void setScaleHeight(double scaleHeight)

setCameraFrameStartLeft

public void setCameraFrameStartLeft(int cameraFrameStartLeft)

setCameraFrameStartTop

public void setCameraFrameStartTop(int cameraFrameStartTop)

setCameraFrameWidth

public void setCameraFrameWidth(int cameraFrameWidth)

setCameraFrameHeight

public void setCameraFrameHeight(int cameraFrameHeight)

setCameraFrameImageOrientation

public void setCameraFrameImageOrientation(int cameraFrameImageOrientation)

setCameraBinning

public void setCameraBinning(int cameraBinning)

setAxioCamSelector

public void setAxioCamSelector(int axioCamSelector)

setAxioCamType

public void setAxioCamType(int axioCamType)

setAxioCamResolution

public void setAxioCamResolution(int axioCamResolution)

setAxioCamColorModel

public void setAxioCamColorModel(int axioCamColorModel)

setAxioCamMicroScanning

public void setAxioCamMicroScanning(int axioCamMicroScanning)

setAmplificationIndex

public void setAmplificationIndex(int amplificationIndex)

setAxioCamBlackReference

public void setAxioCamBlackReference(int axioCamBlackReference)

setCameraShadingCorrection

public void setCameraShadingCorrection(int cameraShadingCorrection)

setAxioCamEnhanceColor

public void setAxioCamEnhanceColor(int axioCamEnhanceColor)

setAxioCamNIRMode

public void setAxioCamNIRMode(int axioCamNIRMode)

setAxioCamShutterControl

public void setAxioCamShutterControl(int axioCamShutterControl)

setAxioCamShutterSignal

public void setAxioCamShutterSignal(int axioCamShutterSignal)

setAxioCamDelayTime

public void setAxioCamDelayTime(int axioCamDelayTime)

setMicroscopeMagnification

public void setMicroscopeMagnification(double microscopeMagnification)

setReflectedLightHalogenLampVoltage

public void setReflectedLightHalogenLampVoltage(double reflectedLightHalogenLampVoltage)

setReflectedLightHalogenLampMode

public void setReflectedLightHalogenLampMode(int reflectedLightHalogenLampMode)

setApotomeAutoShutterUsed

public void setApotomeAutoShutterUsed(int apotomeAutoShutterUsed)

setRelFocusPosition1

public void setRelFocusPosition1(double relFocusPosition1)

setRelFocusPosition2

public void setRelFocusPosition2(double relFocusPosition2)

setObjectType

public void setObjectType(int objectType)

setImageMemoryUsage

public void setImageMemoryUsage(double imageMemoryUsage)

setChannelName0

public void setChannelName0(int channelNameChannel0,
                            java.lang.String channelName0)

setChannelName1

public void setChannelName1(int channelNameChannel1,
                            java.lang.String channelName1)

setChannelName2

public void setChannelName2(int channelNameChannel2,
                            java.lang.String channelName2)

setChannelName3

public void setChannelName3(int channelNameChannel3,
                            java.lang.String channelName3)

setExcitationWavelength0

public void setExcitationWavelength0(int excitationWavelengthChannel0,
                                     int excitationWavelength0)

setExcitationWavelength1

public void setExcitationWavelength1(int excitationWavelengthChannel1,
                                     int excitationWavelength1)

setExcitationWavelength2

public void setExcitationWavelength2(int excitationWavelengthChannel2,
                                     int excitationWavelength2)

setExcitationWavelength3

public void setExcitationWavelength3(int excitationWavelengthChannel3,
                                     int excitationWavelength3)

setEmissionWavelength0

public void setEmissionWavelength0(int emissionWavelengthChannel0,
                                   int emissionWavelength0)

setEmissionWavelength1

public void setEmissionWavelength1(int emissionWavelengthChannel1,
                                   int emissionWavelength1)

setEmissionWavelength2

public void setEmissionWavelength2(int emissionWavelengthChannel2,
                                   int emissionWavelength2)

setEmissionWavelength3

public void setEmissionWavelength3(int emissionWavelengthChannel3,
                                   int emissionWavelength3)

setCameraImageAcquisitionTime0

public void setCameraImageAcquisitionTime0(java.lang.String cameraImageAcquisitionTime0)

setCameraImageAcquisitionTime1

public void setCameraImageAcquisitionTime1(java.lang.String cameraImageAcquisitionTime1)

setCameraImageAcquisitionTime2

public void setCameraImageAcquisitionTime2(java.lang.String cameraImageAcquisitionTime2)

setCameraImageAcquisitionTime3

public void setCameraImageAcquisitionTime3(java.lang.String cameraImageAcquisitionTime3)

setImageRelativeTime0

public void setImageRelativeTime0(java.lang.String imageRelativeTime0)

setImageRelativeTime1

public void setImageRelativeTime1(java.lang.String imageRelativeTime1)

setImageRelativeTime2

public void setImageRelativeTime2(java.lang.String imageRelativeTime2)

setImageRelativeTime3

public void setImageRelativeTime3(java.lang.String imageRelativeTime3)

setFileDate

public void setFileDate(java.lang.String fileDate)

setFileSize

public void setFileSize(int fileSize)

setChannel0

public void setChannel0(int channel0)

setChannel1

public void setChannel1(int channel1)

setChannel2

public void setChannel2(int channel2)

setChannel3

public void setChannel3(int channel3)

setAxioCamAnalogGainEnable

public void setAxioCamAnalogGainEnable(int axioCamAnalogGainEnable)

setCameraShutterLiveEnable

public void setCameraShutterLiveEnable(int cameraShutterLiveEnable)

setAxioCamSaturation

public void setAxioCamSaturation(double axioCamSaturation)

setCondenserContrast

public void setCondenserContrast(int condenserContrast)

setCondenserNumericalAperture

public void setCondenserNumericalAperture(double condenserNumericalAperture)

setStageCalibrated

public void setStageCalibrated(java.lang.String stageCalibrated)

setOptovar

public void setOptovar(double optovar)

setCameraBitDepth

public void setCameraBitDepth(int cameraBitDepth)

setExternalShutter1

public void setExternalShutter1(int externalShutter1)

setDocumentType

public void setDocumentType(java.lang.String documentType)

setFilename

public void setFilename(java.lang.String IDTagFileName)

setUserID

public void setUserID(java.lang.String userID)

setUserName

public void setUserName(java.lang.String userName)

setUserCity

public void setUserCity(java.lang.String userCity)

setUserAddress

public void setUserAddress(java.lang.String userAddress)

setUserPhone

public void setUserPhone(java.lang.String userPhone)

setUserFax

public void setUserFax(java.lang.String userFax)

setUserCountry

public void setUserCountry(java.lang.String userCountry)

setUserCompany

public void setUserCompany(java.lang.String userCompany)

setUserCompanyLogo

public void setUserCompanyLogo(java.lang.String userCompanyLogo)

setDeviceScalingName

public void setDeviceScalingName(java.lang.String deviceScalingName)

setCamera

public void setCamera(java.lang.String camera)

setMicroscopeName

public void setMicroscopeName(java.lang.String microscopeName)

setObjectiveID

public void setObjectiveID(java.lang.String objectiveID)

setObjectiveName

public void setObjectiveName(java.lang.String objectiveName)

setReflectorID

public void setReflectorID(java.lang.String reflectorID)

setReflector

public void setReflector(java.lang.String reflector)

setReference

public void setReference(java.lang.String reference)

setFileLink

public void setFileLink(java.lang.String fileLink)

setFileID

public void setFileID(java.lang.String fileID)

setLastModifiedBy

public void setLastModifiedBy(java.lang.String lastModifiedBy)

setTitle

public void setTitle(java.lang.String title)

setApotomeGridName

public void setApotomeGridName(java.lang.String apotomeGridName)

setApotomeFilterName

public void setApotomeFilterName(java.lang.String apotomeFilterName)

setApotomeCamPhaseAngles

public void setApotomeCamPhaseAngles(java.lang.String apotomeCamPhaseAngles)

setApotomeCamGenericCameraName

public void setApotomeCamGenericCameraName(java.lang.String apotomeCamGenericCameraName)

setDocumentSubtype

public void setDocumentSubtype(java.lang.String documentSubtype)

setComments

public void setComments(java.lang.String comments)