java.lang.Object
- gov.nih.mipav.model.structures.ModelSerialCloneable
- - gov.nih.mipav.model.file.FileInfoBase
  - - gov.nih.mipav.model.file.FileInfoMRC

All Implemented Interfaces:

java.io.Serializable, java.lang.Cloneable
```
public class FileInfoMRC
extends FileInfoBase
```
This structures contains the information that describes how a MRC image is stored on disk.

See Also:

Serialized Form

Nested Class Summary
- Nested classes/interfaces inherited from class gov.nih.mipav.model.file.FileInfoBase
  FileInfoBase.AxisOrientation, FileInfoBase.ImageOrientation, FileInfoBase.Modality, FileInfoBase.Unit, FileInfoBase.UnitType

Field Summary

Fields
Modifier and Type	Field	Description
`private float`	`alpha`	DOCUMENT ME!
`private float`	`beta`	DOCUMENT ME!
`private short`	`creatorID`	DOCUMENT ME!
`private float`	`gamma`	DOCUMENT ME!
`private short`	`idType`	DOCUMENT ME!
`private int`	`impliedFlagBytes`	DOCUMENT ME!
`private short`	`ispg`	DOCUMENT ME!
`private java.lang.String[]`	`label`	DOCUMENT ME!
`private short`	`lens`	DOCUMENT ME!
`private int`	`mapC`	DOCUMENT ME!
`private int`	`mapR`	DOCUMENT ME!
`private int`	`mapS`	DOCUMENT ME!
`private short`	`nd1`	DOCUMENT ME!
`private short`	`nd2`	DOCUMENT ME!
`private int`	`next`	DOCUMENT ME!
`private short`	`nint`	DOCUMENT ME!
`private short`	`nreal`	DOCUMENT ME!
`private short`	`nSymbt`	DOCUMENT ME!
`private short`	`nwave`	DOCUMENT ME!
`private float`	`rms`	DOCUMENT ME!
`private static long`	`serialVersionUID`	Use serialVersionUID for interoperability.
`private float[]`	`tiltAngles`	DOCUMENT ME!
`private short`	`vd1`	DOCUMENT ME!
`private short`	`vd2`	DOCUMENT ME!
`private short`	`wave1`	DOCUMENT ME!
`private short`	`wave2`	DOCUMENT ME!
`private short`	`wave3`	DOCUMENT ME!
`private short`	`wave4`	DOCUMENT ME!
`private short`	`wave5`	DOCUMENT ME!

Fields inherited from class gov.nih.mipav.model.file.FileInfoBase
ANGSTROMS, ANGSTROMS_STRING, AXIAL, axisOrientation, axisOrientationStr, BIOMAGNETIC_IMAGING, cameraMake, cameraModel, CENTIMETERS, CENTIMETERS_STRING, COLOR_FLOW_DOPPLER, COMPRESSION_BZIP2, COMPRESSION_GZIP, COMPRESSION_NONE, COMPRESSION_ZIP, COMPUTED_RADIOGRAPHY, COMPUTED_TOMOGRAPHY, conversionSpaceTimeUnits, CORONAL, DEGREES, DEGREES_STRING, DIAPHANOGRAPHY, DIGITAL_RADIOGRAPHY, DUPLEX_DOPPLER, ENDOSCOPY, exposureTime, EXTERNAL_CAMERA_PHOTOGRAPHY, FA, fileName, fileSuffix, FNumber, focalLength, focalLength35, GENERAL_MICROSCOPY, HARDCOPY, HOURS, HOURS_STRING, HZ, HZ_STRING, ICG, imageOrientation, INCHES, INCHES_STRING, INTRAORAL_RADIOGRAPHY, ISOSpeedRating, KILOMETERS, KILOMETERS_STRING, LASER_SURFACE_SCAN, MAGNETIC_RESONANCE, MAGNETIC_RESONANCE_ANGIOGRAPHY, MAGNETIC_RESONANCE_SPECTROSCOPY, MAMMOGRAPHY, METERS, METERS_STRING, MICROMETERS, MICROMETERS_STRING, MICROSEC, MICROSEC_STRING, MILES, MILES_STRING, MILLIMETERS, MILLIMETERS_STRING, MILLISEC, MILLISEC_STRING, MILS, MILS_STRING, MINUTES, MINUTES_STRING, modality, NANOMETERS, NANOMETERS_STRING, NANOSEC, NANOSEC_STRING, NUCLEAR_MEDICINE, ORI_A2P_TYPE, ORI_I2S_TYPE, ORI_L2R_TYPE, ORI_P2A_TYPE, ORI_R2L_TYPE, ORI_S2I_TYPE, ORI_UNKNOWN_TYPE, origin, OTHER, PANORAMIC_XRAY, POSITRON_EMISSION_TOMOGRAPHY, PPM, PPM_STRING, RADIO_FLUOROSCOPY, RADIOGRAPHIC_IMAGING, RADIOTHERAPY_DOSE, RADIOTHERAPY_IMAGE, RADIOTHERAPY_PLAN, RADIOTHERAPY_RECORD, RADIOTHERAPY_STRUCTURE_SET, RADS, RADS_STRING, RED_FREE, SAGITTAL, SECONDS, SECONDS_STRING, SINGLE_PHOTON_EMISSION_COMPUTED_TOMOGRAPHY, SLIDE_MICROSCOPY, sUnits, tagDescription, tagName, THERMOGRAPHY, TRANSFORM_ANOTHER_DATASET, TRANSFORM_MNI_152, TRANSFORM_SCANNER_ANATOMICAL, TRANSFORM_TALAIRACH_TOURNOUX, TRANSFORM_UNKNOWN, tUnits, ULTRASOUND, unitsOfMeasure, UNKNOWN_MEASURE, UNKNOWN_MODALITY, UNKNOWN_ORIENT, UNKNOWN_STRING, XRAY_ANGIOGRAPHY

Constructor Summary

Constructors
Constructor Description

FileInfoMRC(java.lang.String name, java.lang.String directory, int format)
FileInfoMRC - file info storage constructor.

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`void`	`displayAboutInfo(JDialogBase dlog, TransMatrix matrix)`	Displays the file information.
`void`	`setAlpha(float alpha)`	DOCUMENT ME!
`void`	`setBeta(float beta)`	DOCUMENT ME!
`void`	`setCreatorID(short creatorID)`	DOCUMENT ME!
`void`	`setGamma(float gamma)`	DOCUMENT ME!
`void`	`setIDType(short idType)`	DOCUMENT ME!
`void`	`setIspg(short ispg)`	DOCUMENT ME!
`void`	`setLabel(java.lang.String[] label)`	DOCUMENT ME!
`void`	`setLens(short lens)`	DOCUMENT ME!
`void`	`setMapC(int mapC)`	DOCUMENT ME!
`void`	`setMapR(int mapR)`	DOCUMENT ME!
`void`	`setMapS(int mapS)`	DOCUMENT ME!
`void`	`setND1(short nd1)`	DOCUMENT ME!
`void`	`setND2(short nd2)`	DOCUMENT ME!
`void`	`setNext(int next)`	DOCUMENT ME!
`void`	`setNint(short nint)`	DOCUMENT ME!
`void`	`setNreal(short nreal)`	DOCUMENT ME!
`void`	`setNSymbt(short nSymbt)`	DOCUMENT ME!
`void`	`setNWave(short nwave)`	DOCUMENT ME!
`void`	`setRMS(float rms)`	DOCUMENT ME!
`void`	`setTiltAngles(float[] tiltAngles)`	DOCUMENT ME!
`void`	`setVD1(short vd1)`	DOCUMENT ME!
`void`	`setVD2(short vd2)`	DOCUMENT ME!
`void`	`setWave1(short wave1)`	DOCUMENT ME!
`void`	`setWave2(short wave2)`	DOCUMENT ME!
`void`	`setWave3(short wave3)`	DOCUMENT ME!
`void`	`setWave4(short wave4)`	DOCUMENT ME!
`void`	`setWave5(short wave5)`	DOCUMENT ME!

Methods inherited from class gov.nih.mipav.model.file.FileInfoBase
copyCoreInfo, copyCoreInfo, displayAboutInfo, displayPrimaryInfo, finalize, getAboutInfo, getAllSameDimUnits, getAreaUnitsOfMeasureStr, getAxisDirection, getAxisOrientation, getAxisOrientation, getAxisOrientationFromStr, getAxisOrientationStr, getCameraMake, getCameraModel, getCompressionType, getDataType, getDataTypeFromStr, getEndianess, getEndianessFromStr, getExposureTime, getExtents, getFileDirectory, getFileFormat, getFileName, getFileSuffix, getFNumber, getFocalLength, getFocalLength35, getImageOrientation, getImageOrientationFromStr, getImageOrientationStr, getIs2_5D, getISOSpeedRating, getLPSOrigin, getLUT, getMax, getMaxB, getMaxG, getMaxR, getMin, getMinB, getMinG, getMinR, getModality, getModalityFromStr, getModalityStr, getModalityStr, getMultiFile, getNumOfBytesPerPixel, getOffset, getOrigin, getOrigin, getOriginalEndianess, getOriginAtSlice, getPhotometric, getPixelPadValue, getPrimaryInfo, getRescaleIntercept, getRescaleSlope, getResolution, getResolutions, getSize, getSliceThickness, getUnitsOfMeasure, getUnitsOfMeasure, getUnitsOfMeasureAbbrevStr, getUnitsOfMeasureAbbrevStr, getUnitsOfMeasureFromStr, getUnitsOfMeasureStr, getUnitsOfMeasureStr, getVolumeUnitsOfMeasureStr, isDicomOrdered, oppositeOrient, sameAxis, setAxisOrientation, setAxisOrientation, setCameraMake, setCameraModel, setCompressionType, setDataType, setEndianess, setExposureTime, setExtents, setExtents, setFileDirectory, setFileFormat, setFileName, setFileSuffix, setFNumber, setFocalLength, setFocalLength35, setImageOrientation, setISOSpeedRating, setLUT, setMax, setMaxB, setMaxG, setMaxR, setMin, setMinB, setMinG, setMinR, setModality, setMultiFile, setOffset, setOrigin, setOrigin, setOriginalEndianess, setPhotometric, setPixelPadValue, setRescaleIntercept, setRescaleSlope, setResolutions, setResolutions, setSliceThickness, setTagDescription, setTagName, setUnitsOfMeasure, setUnitsOfMeasure, setUnitsOfMeasure, setUnitsOfMeasure, toString

Methods inherited from class gov.nih.mipav.model.structures.ModelSerialCloneable
clone, nativeClone

Methods inherited from class java.lang.Object
equals, getClass, hashCode, notify, notifyAll, wait, wait, wait

- Field Detail
  - serialVersionUID
```
private static final long serialVersionUID
```
    Use serialVersionUID for interoperability.
    
    See Also:
    
    Constant Field Values
  - alpha
```
private float alpha
```
    DOCUMENT ME!
  - beta
```
private float beta
```
    DOCUMENT ME!
  - gamma
```
private float gamma
```
    DOCUMENT ME!
  - creatorID
```
private short creatorID
```
    DOCUMENT ME!
  - idType
```
private short idType
```
    DOCUMENT ME!
  - impliedFlagBytes
```
private int impliedFlagBytes
```
    DOCUMENT ME!
  - ispg
```
private short ispg
```
    DOCUMENT ME!
  - nSymbt
```
private short nSymbt
```
    DOCUMENT ME!
  - label
```
private java.lang.String[] label
```
    DOCUMENT ME!
  - lens
```
private short lens
```
    DOCUMENT ME!
  - mapC
```
private int mapC
```
    DOCUMENT ME!
  - mapR
```
private int mapR
```
    DOCUMENT ME!
  - mapS
```
private int mapS
```
    DOCUMENT ME!
  - nd1
```
private short nd1
```
    DOCUMENT ME!
  - nd2
```
private short nd2
```
    DOCUMENT ME!
  - vd1
```
private short vd1
```
    DOCUMENT ME!
  - vd2
```
private short vd2
```
    DOCUMENT ME!
  - next
```
private int next
```
    DOCUMENT ME!
  - nint
```
private short nint
```
    DOCUMENT ME!
  - nreal
```
private short nreal
```
    DOCUMENT ME!
  - nwave
```
private short nwave
```
    DOCUMENT ME!
  - rms
```
private float rms
```
    DOCUMENT ME!
  - tiltAngles
```
private float[] tiltAngles
```
    DOCUMENT ME!
  - wave1
```
private short wave1
```
    DOCUMENT ME!
  - wave2
```
private short wave2
```
    DOCUMENT ME!
  - wave3
```
private short wave3
```
    DOCUMENT ME!
  - wave4
```
private short wave4
```
    DOCUMENT ME!
  - wave5
```
private short wave5
```
    DOCUMENT ME!
- Constructor Detail
  - FileInfoMRC
```
public FileInfoMRC(java.lang.String name,
                   java.lang.String directory,
                   int format)
```
    FileInfoMRC - file info storage constructor.
    
    Parameters:
    
    name - file name
    
    directory - directory
    
    format - file format
- Method Detail
  - displayAboutInfo
```
public void displayAboutInfo(JDialogBase dlog,
                             TransMatrix matrix)
```
    Displays the file information.
    
    Specified by:
    
    displayAboutInfo in class FileInfoBase
    
    Parameters:
    
    dlog - dialog box that is written to
    
    matrix - transformation matrix
  - setAlpha
```
public void setAlpha(float alpha)
```
    DOCUMENT ME!
    
    Parameters:
    
    alpha - DOCUMENT ME!
  - setBeta
```
public void setBeta(float beta)
```
    DOCUMENT ME!
    
    Parameters:
    
    beta - DOCUMENT ME!
  - setCreatorID
```
public void setCreatorID(short creatorID)
```
    DOCUMENT ME!
    
    Parameters:
    
    creatorID - DOCUMENT ME!
  - setGamma
```
public void setGamma(float gamma)
```
    DOCUMENT ME!
    
    Parameters:
    
    gamma - DOCUMENT ME!
  - setIDType
```
public void setIDType(short idType)
```
    DOCUMENT ME!
    
    Parameters:
    
    idType - DOCUMENT ME!
  - setIspg
```
public void setIspg(short ispg)
```
    DOCUMENT ME!
    
    Parameters:
    
    ispg - DOCUMENT ME!
  - setLabel
```
public void setLabel(java.lang.String[] label)
```
    DOCUMENT ME!
    
    Parameters:
    
    label - DOCUMENT ME!
  - setLens
```
public void setLens(short lens)
```
    DOCUMENT ME!
    
    Parameters:
    
    lens - DOCUMENT ME!
  - setMapC
```
public void setMapC(int mapC)
```
    DOCUMENT ME!
    
    Parameters:
    
    mapC - DOCUMENT ME!
  - setMapR
```
public void setMapR(int mapR)
```
    DOCUMENT ME!
    
    Parameters:
    
    mapR - DOCUMENT ME!
  - setMapS
```
public void setMapS(int mapS)
```
    DOCUMENT ME!
    
    Parameters:
    
    mapS - DOCUMENT ME!
  - setND1
```
public void setND1(short nd1)
```
    DOCUMENT ME!
    
    Parameters:
    
    nd1 - DOCUMENT ME!
  - setND2
```
public void setND2(short nd2)
```
    DOCUMENT ME!
    
    Parameters:
    
    nd2 - DOCUMENT ME!
  - setNext
```
public void setNext(int next)
```
    DOCUMENT ME!
    
    Parameters:
    
    next - DOCUMENT ME!
  - setNint
```
public void setNint(short nint)
```
    DOCUMENT ME!
    
    Parameters:
    
    nint - DOCUMENT ME!
  - setNreal
```
public void setNreal(short nreal)
```
    DOCUMENT ME!
    
    Parameters:
    
    nreal - DOCUMENT ME!
  - setNSymbt
```
public void setNSymbt(short nSymbt)
```
    DOCUMENT ME!
    
    Parameters:
    
    nSymbt - DOCUMENT ME!
  - setNWave
```
public void setNWave(short nwave)
```
    DOCUMENT ME!
    
    Parameters:
    
    nwave - DOCUMENT ME!
  - setRMS
```
public void setRMS(float rms)
```
    DOCUMENT ME!
    
    Parameters:
    
    rms - DOCUMENT ME!
  - setTiltAngles
```
public void setTiltAngles(float[] tiltAngles)
```
    DOCUMENT ME!
    
    Parameters:
    
    tiltAngles - DOCUMENT ME!
  - setVD1
```
public void setVD1(short vd1)
```
    DOCUMENT ME!
    
    Parameters:
    
    vd1 - DOCUMENT ME!
  - setVD2
```
public void setVD2(short vd2)
```
    DOCUMENT ME!
    
    Parameters:
    
    vd2 - DOCUMENT ME!
  - setWave1
```
public void setWave1(short wave1)
```
    DOCUMENT ME!
    
    Parameters:
    
    wave1 - DOCUMENT ME!
  - setWave2
```
public void setWave2(short wave2)
```
    DOCUMENT ME!
    
    Parameters:
    
    wave2 - DOCUMENT ME!
  - setWave3
```
public void setWave3(short wave3)
```
    DOCUMENT ME!
    
    Parameters:
    
    wave3 - DOCUMENT ME!
  - setWave4
```
public void setWave4(short wave4)
```
    DOCUMENT ME!
    
    Parameters:
    
    wave4 - DOCUMENT ME!
  - setWave5
```
public void setWave5(short wave5)
```
    DOCUMENT ME!
    
    Parameters:
    
    wave5 - DOCUMENT ME!

Class FileInfoMRC

Nested Class Summary

Nested classes/interfaces inherited from class gov.nih.mipav.model.file.FileInfoBase

Field Summary

Fields inherited from class gov.nih.mipav.model.file.FileInfoBase

Constructor Summary

Method Summary

Methods inherited from class gov.nih.mipav.model.file.FileInfoBase

Methods inherited from class gov.nih.mipav.model.structures.ModelSerialCloneable

Methods inherited from class java.lang.Object

Field Detail

serialVersionUID

alpha

beta

gamma

creatorID

idType

impliedFlagBytes

ispg

nSymbt

label

lens

mapC

mapR

mapS

nd1

nd2

vd1

vd2

next

nint

nreal

nwave

rms

tiltAngles

wave1

wave2

wave3

wave4

wave5

Constructor Detail

FileInfoMRC

Method Detail

displayAboutInfo

setAlpha

setBeta

setCreatorID

setGamma

setIDType

setIspg

setLabel

setLens

setMapC

setMapR

setMapS

setND1

setND2

setNext

setNint

setNreal

setNSymbt

setNWave

setRMS

setTiltAngles

setVD1

setVD2

setWave1

setWave2

setWave3

setWave4

setWave5