Package gov.nih.mipav.model.file

Class FileInfoFits

java.lang.Object

gov.nih.mipav.model.structures.ModelSerialCloneable

gov.nih.mipav.model.file.FileInfoBase

gov.nih.mipav.model.file.FileInfoFits

All Implemented Interfaces:

java.io.Serializable, java.lang.Cloneable

public class FileInfoFits
extends FileInfoBase

This structures contains the information that describes how a Fits image is stored on disk.

See Also:

Serialized Form

Nested Class Summary

Nested classes/interfaces inherited from class gov.nih.mipav.model.file.FileInfoBase

FileInfoBase.AxisOrientation, FileInfoBase.ImageOrientation, FileInfoBase.Modality, FileInfoBase.Unit, FileInfoBase.UnitType

Field Summary

Fields

Modifier and Type	Field	Description
private java.lang.String	author
private java.lang.String	BUNIT
private java.lang.String	CTYPE1
private java.lang.String	CTYPE2
private java.lang.String	CTYPE3
private java.lang.String	CTYPE4
private java.lang.String	CTYPE5
private java.lang.String	CUNIT1
private java.lang.String	CUNIT2
private java.lang.String	CUNIT3
private java.lang.String	CUNIT4
private java.lang.String	CUNIT5
private java.lang.String	dateAcquired
private java.lang.String	dateProcessed
private java.lang.String	dateWritten
private float	focalRatio
private java.lang.String	instrument
private java.lang.String	jobName
private java.lang.String	object
private java.lang.String	observer
private java.lang.String	origin
private static long	serialVersionUID	Use serialVersionUID for interoperability.
private java.lang.String	timeAcquired
private java.lang.String	timeProcessed
private java.lang.String	timeWritten

Fields inherited from class gov.nih.mipav.model.file.FileInfoBase

ANGSTROMS, ANGSTROMS_STRING, AXIAL, axisOrientation, axisOrientationStr, BIOMAGNETIC_IMAGING, cameraMake, cameraModel, CENTIMETERS, CENTIMETERS_STRING, COLOR_FLOW_DOPPLER, COMPRESSION_BZIP2, COMPRESSION_GZIP, COMPRESSION_NONE, COMPRESSION_ZIP, COMPUTED_RADIOGRAPHY, COMPUTED_TOMOGRAPHY, conversionSpaceTimeUnits, CORONAL, DEGREES, DEGREES_STRING, DIAPHANOGRAPHY, DIGITAL_RADIOGRAPHY, DUPLEX_DOPPLER, ENDOSCOPY, exposureTime, EXTERNAL_CAMERA_PHOTOGRAPHY, FA, fileName, fileSuffix, FNumber, focalLength, focalLength35, GENERAL_MICROSCOPY, HARDCOPY, HOURS, HOURS_STRING, HZ, HZ_STRING, ICG, imageOrientation, INCHES, INCHES_STRING, INTRAORAL_RADIOGRAPHY, ISOSpeedRating, KILOMETERS, KILOMETERS_STRING, LASER_SURFACE_SCAN, MAGNETIC_RESONANCE, MAGNETIC_RESONANCE_ANGIOGRAPHY, MAGNETIC_RESONANCE_SPECTROSCOPY, MAMMOGRAPHY, METERS, METERS_STRING, MICROMETERS, MICROMETERS_STRING, MICROSEC, MICROSEC_STRING, MILES, MILES_STRING, MILLIMETERS, MILLIMETERS_STRING, MILLISEC, MILLISEC_STRING, MILS, MILS_STRING, MINUTES, MINUTES_STRING, modality, NANOMETERS, NANOMETERS_STRING, NANOSEC, NANOSEC_STRING, NUCLEAR_MEDICINE, ORI_A2P_TYPE, ORI_I2S_TYPE, ORI_L2R_TYPE, ORI_P2A_TYPE, ORI_R2L_TYPE, ORI_S2I_TYPE, ORI_UNKNOWN_TYPE, OTHER, PANORAMIC_XRAY, POSITRON_EMISSION_TOMOGRAPHY, PPM, PPM_STRING, RADIO_FLUOROSCOPY, RADIOGRAPHIC_IMAGING, RADIOTHERAPY_DOSE, RADIOTHERAPY_IMAGE, RADIOTHERAPY_PLAN, RADIOTHERAPY_RECORD, RADIOTHERAPY_STRUCTURE_SET, RADS, RADS_STRING, RED_FREE, SAGITTAL, SECONDS, SECONDS_STRING, SINGLE_PHOTON_EMISSION_COMPUTED_TOMOGRAPHY, SLIDE_MICROSCOPY, sUnits, tagDescription, tagName, THERMOGRAPHY, TRANSFORM_ANOTHER_DATASET, TRANSFORM_MNI_152, TRANSFORM_SCANNER_ANATOMICAL, TRANSFORM_TALAIRACH_TOURNOUX, TRANSFORM_UNKNOWN, tUnits, ULTRASOUND, unitsOfMeasure, UNKNOWN_MEASURE, UNKNOWN_MODALITY, UNKNOWN_ORIENT, UNKNOWN_STRING, XRAY_ANGIOGRAPHY

Constructor Summary

Constructors

Constructor	Description
FileInfoFits(java.lang.String name, java.lang.String directory, int format)	File info storage constructor.

Method Summary

Modifier and Type	Method	Description
void	displayAboutInfo(JDialogBase dlog, TransMatrix matrix)	Displays the file information.
void	setAuthor(java.lang.String author)
void	setBUNIT(java.lang.String BUNIT)
void	setCTYPE1(java.lang.String CTYPE1)
void	setCTYPE2(java.lang.String CTYPE2)
void	setCTYPE3(java.lang.String CTYPE3)
void	setCTYPE4(java.lang.String CTYPE4)
void	setCTYPE5(java.lang.String CTYPE5)
void	setCUNIT1(java.lang.String CUNIT1)
void	setCUNIT2(java.lang.String CUNIT2)
void	setCUNIT3(java.lang.String CUNIT3)
void	setCUNIT4(java.lang.String CUNIT4)
void	setCUNIT5(java.lang.String CUNIT5)
void	setDateAcquired(java.lang.String dateAcquired)
void	setDateProcessed(java.lang.String dateProcessed)
void	setDateWritten(java.lang.String dateWritten)
void	setFocalRatio(float focalRatio)
void	setInstrument(java.lang.String instrument)
void	setJobName(java.lang.String jobName)
void	setObject(java.lang.String object)
void	setObserver(java.lang.String observer)
void	setOrigin(java.lang.String origin)
void	setTimeAcquired(java.lang.String timeAcquired)
void	setTimeProcessed(java.lang.String timeProcessed)
void	setTimeWritten(java.lang.String timeWritten)

Methods inherited from class gov.nih.mipav.model.file.FileInfoBase

copyCoreInfo, copyCoreInfo, displayAboutInfo, displayPrimaryInfo, finalize, getAboutInfo, getAllSameDimUnits, getAreaUnitsOfMeasureStr, getAxisDirection, getAxisOrientation, getAxisOrientation, getAxisOrientationFromStr, getAxisOrientationStr, getCameraMake, getCameraModel, getCompressionType, getDataType, getDataTypeFromStr, getEndianess, getEndianessFromStr, getExposureTime, getExtents, getFileDirectory, getFileFormat, getFileName, getFileSuffix, getFNumber, getFocalLength, getFocalLength35, getImageOrientation, getImageOrientationFromStr, getImageOrientationStr, getIs2_5D, getISOSpeedRating, getLPSOrigin, getLUT, getMax, getMaxB, getMaxG, getMaxR, getMin, getMinB, getMinG, getMinR, getModality, getModalityFromStr, getModalityStr, getModalityStr, getMultiFile, getNumOfBytesPerPixel, getOffset, getOrigin, getOrigin, getOriginalEndianess, getOriginAtSlice, getPhotometric, getPixelPadValue, getPrimaryInfo, getRescaleIntercept, getRescaleSlope, getResolution, getResolutions, getSize, getSliceThickness, getUnitsOfMeasure, getUnitsOfMeasure, getUnitsOfMeasureAbbrevStr, getUnitsOfMeasureAbbrevStr, getUnitsOfMeasureFromStr, getUnitsOfMeasureStr, getUnitsOfMeasureStr, getVolumeUnitsOfMeasureStr, isDicomOrdered, oppositeOrient, sameAxis, setAxisOrientation, setAxisOrientation, setCameraMake, setCameraModel, setCompressionType, setDataType, setEndianess, setExposureTime, setExtents, setExtents, setFileDirectory, setFileFormat, setFileName, setFileSuffix, setFNumber, setFocalLength, setFocalLength35, setImageOrientation, setISOSpeedRating, setLUT, setMax, setMaxB, setMaxG, setMaxR, setMin, setMinB, setMinG, setMinR, setModality, setMultiFile, setOffset, setOrigin, setOrigin, setOriginalEndianess, setPhotometric, setPixelPadValue, setRescaleIntercept, setRescaleSlope, setResolutions, setResolutions, setSliceThickness, setTagDescription, setTagName, setUnitsOfMeasure, setUnitsOfMeasure, setUnitsOfMeasure, setUnitsOfMeasure, toString

Methods inherited from class gov.nih.mipav.model.structures.ModelSerialCloneable

clone, nativeClone

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

serialVersionUID

private static final long serialVersionUID

Use serialVersionUID for interoperability.

See Also:

Constant Field Values

origin

private java.lang.String origin

dateAcquired

private java.lang.String dateAcquired

timeAcquired

private java.lang.String timeAcquired

dateProcessed

private java.lang.String dateProcessed

timeProcessed

private java.lang.String timeProcessed

dateWritten

private java.lang.String dateWritten

timeWritten

private java.lang.String timeWritten

jobName

private java.lang.String jobName

object

private java.lang.String object

observer

private java.lang.String observer

instrument

private java.lang.String instrument

focalRatio

private float focalRatio

CTYPE1

private java.lang.String CTYPE1

CTYPE2

private java.lang.String CTYPE2

CTYPE3

private java.lang.String CTYPE3

CTYPE4

private java.lang.String CTYPE4

CTYPE5

private java.lang.String CTYPE5

CUNIT1

private java.lang.String CUNIT1

CUNIT2

private java.lang.String CUNIT2

CUNIT3

private java.lang.String CUNIT3

CUNIT4

private java.lang.String CUNIT4

CUNIT5

private java.lang.String CUNIT5

BUNIT

private java.lang.String BUNIT

author

private java.lang.String author

Constructor Detail

FileInfoFits

public FileInfoFits(java.lang.String name,
                    java.lang.String directory,
                    int format)

File info storage constructor.

Parameters:

name - file name

directory - directory

format - file format

Method Detail

displayAboutInfo

public void displayAboutInfo(JDialogBase dlog,
                             TransMatrix matrix)

Displays the file information.

Specified by:

displayAboutInfo in class FileInfoBase

Parameters:

dlog - dialog box that is written to

matrix - transformation matrix

setBUNIT

public void setBUNIT(java.lang.String BUNIT)

setCTYPE1

public void setCTYPE1(java.lang.String CTYPE1)

setCTYPE2

public void setCTYPE2(java.lang.String CTYPE2)

setCTYPE3

public void setCTYPE3(java.lang.String CTYPE3)

setCTYPE4

public void setCTYPE4(java.lang.String CTYPE4)

setCTYPE5

public void setCTYPE5(java.lang.String CTYPE5)

setCUNIT1

public void setCUNIT1(java.lang.String CUNIT1)

setCUNIT2

public void setCUNIT2(java.lang.String CUNIT2)

setCUNIT3

public void setCUNIT3(java.lang.String CUNIT3)

setCUNIT4

public void setCUNIT4(java.lang.String CUNIT4)

setCUNIT5

public void setCUNIT5(java.lang.String CUNIT5)

setDateAcquired

public void setDateAcquired(java.lang.String dateAcquired)

setTimeAcquired

public void setTimeAcquired(java.lang.String timeAcquired)

setDateProcessed

public void setDateProcessed(java.lang.String dateProcessed)

setTimeProcessed

public void setTimeProcessed(java.lang.String timeProcessed)

setDateWritten

public void setDateWritten(java.lang.String dateWritten)

setTimeWritten

public void setTimeWritten(java.lang.String timeWritten)

setJobName

public void setJobName(java.lang.String jobName)

setOrigin

public void setOrigin(java.lang.String origin)

setObject

public void setObject(java.lang.String object)

setObserver

public void setObserver(java.lang.String observer)

setInstrument

public void setInstrument(java.lang.String instrument)

setFocalRatio

public void setFocalRatio(float focalRatio)

setAuthor

public void setAuthor(java.lang.String author)