Difference between revisions of "Saving and printing images"

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[[File:MINCAttributesToSaveDialogBox.jpg|200px|thumb|left|MINC Attributes to Save dialog box]]
 
[[File:MINCAttributesToSaveDialogBox.jpg|200px|thumb|left|MINC Attributes to Save dialog box]]
  
'''Image orientation'''
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[[File:minc_dicom.jpg|200px|thumb|right|Comparison of MINC and DICOM image orientation]]
Specify the image orientation here if need. Note that, often the proper value is already entered in the dialog box. Then use the appropriate list boxes to specify the X, Y and Z axis orientation. <br /> L/R Start - TBD<br /> L/R Space - TBD<br /> P/A Start - TBD<br /> P/A Space - TBD<br /> I/S Start - TBD<br /> I/S Space - TBD<br />
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'''OK'''
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'''Image orientation:'''
 +
Specify the image orientation here if need. Note that, often the proper value is already entered in the dialog box. Then use the appropriate list boxes to specify the X, Y and Z axis orientation.
  
Saves the selected image based on your choices in this dialog box.
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'''OK''' - Saves the selected image based on your choices in this dialog box.
  
'''Cancel'''
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'''Cancel''' - Disregards changes you made in this dialog box and closes the dialog box.
  
Disregards changes you made in this dialog box and closes the dialog box.
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=== Saving images to XML format ===
  
==== Comparison of MINC and DICOM image orientation ====
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To record a history of actions that were performed on images, you should save the images to [[Supported Formats#MipavXmlFormat| MIPAV XML format]]. When you save images to XML format, MIPAV creates two files for each image: a RAW file, which contains image data, and an XML file. The XML file includes image attributes, such as action history. You can view the attributes of an image by selecting Image > Attributes > Edit Attributes or by viewing the .xml file using a text editor or an internet browser.
  
[[File:minc_dicom.jpg|350px|thumb|left|Comparison of MINC and DICOM image orientation]]
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'''To save images to XML format'''
 +
<ol>
 +
<li>Select File > Save as. The Save Image as dialog box opens.</li>
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<li>Accept the name currently in File name or type a new name. Make sure you add <span style="font-family:courier">
 +
.xml</span> as the extension.</li>
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<li>Click Save. MIPAV saves the file under the name and extension you specified and begins, from this point on, recording a history of actions performed on the image.</li>
 +
</ol>
  
==== Saving images to XML format ====
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=== Saving images to another format or renaming images ===
 +
[[File:SaveImageAsDialogBox.jpg|350px|thumb|left|The Save As dialog box]]
  
<div style="font-style: normal; font-weight: normal; margin-bottom: 6pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000"> To record a history of actions that were performed on images, you should save the images to XML format. When you save images to XML format, MIPAV creates two files for each image: a RAW file, which contains image data, and an XML file. The XML file includes image attributes, such as action history. You can view the attributes of an image by selecting Image &gt; Attributes &gt; Edit Attributes or by viewing the .<span style="font-weight: normal; text-decoration: none; text-transform: none; vertical-align: baseline">''<font color="#000000">xml</font>''</span> file using a text editor or an internet browser. For more information on recording a history of actions, refer to "Saving a history of actions on images (TBD)".<br /></font></div><div style="font-style: normal; margin-bottom: 6pt; margin-left: 0pt; margin-right: 0pt; margin-top: 14pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline">'''<font color="#000000"> To save images to XML format<br /></font>'''</div><div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 18pt; margin-right: 0pt; margin-top: 6pt; text-align: left; text-decoration: none; text-indent: -18pt; text-transform: none; vertical-align: baseline"><font color="#000000">  1 Select File &gt; Save as.<br /></font></div><div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 18pt; margin-right: 0pt; margin-top: 6pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000"> The Save Image as dialog box opens.<br /></font></div><div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 18pt; margin-right: 0pt; margin-top: 6pt; text-align: left; text-decoration: none; text-indent: -18pt; text-transform: none; vertical-align: baseline"><font color="#000000">  2 Accept the name currently in File name or type a new name. Make sure you add <span style="font-weight: normal; text-decoration: none; text-transform: none; vertical-align: baseline">''<font color="#000000">.xml</font>''</span> as the extension.<br /></font></div><div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 18pt; margin-right: 0pt; margin-top: 6pt; text-align: left; text-decoration: none; text-indent: -18pt; text-transform: none; vertical-align: baseline"><font color="#000000">  3 Click Save.<br /></font></div><div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 18pt; margin-right: 0pt; margin-top: 6pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000"> MIPAV saves the file under the name and extension you specified and begins, from this point on, recording a history of actions performed on the image.<br /></font></div>
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==== To save images to format different from the original file: ====
  
==== Saving images to another format or renaming images ====
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<ol>
'''To save images to format different from the original file<br />'''
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<li>Select File &gt; Save as.The Save Image as dialog box appears.</li>
1 Select File &gt; Save as.The Save Image as dialog box appears (Figure 45). <br />
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2 Type the new name in File name. To save the file in a different format, change the [[Supported Formats | file extension]].</li>
2 Type the new name in File name. To save the file in a different format, change the file extension. A list of extensions appears in Table 1, Appendix C.<br />
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<li>Click Save. MIPAV saves the file under the name and extension you specified.<br />
3 Click Save. MIPAV saves the file under the name and extension you specified.<br />
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</ol>
'''To rename images<br />'''
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1 Select File &gt; Save as. The Save Image as dialog appears (Figure 45).<br />
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2 Type the new name in File name. Either keep the extension already specified or change it to another file type. A list of extensions appears in Appendix C: Table 1.<br />
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3 Click Save. MIPAV saves the file under the name and extension you specified.<br />
+
  
'''Figure 45. Save Image as dialog box'''<br />
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==== To rename images: ====
[[Image:SaveImageAsDialogBox.jpg]]
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<ol>
 +
<li>Select File &gt; Save as. The Save Image as dialog appears.</li>
 +
<li>Type the new name in File name. Either keep the extension already specified or change it to another [[Supported Formats | file type]].</li>
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<li> Click Save. MIPAV saves the file under the name and extension you specified.</li>
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</ol>
  
 
=== Printing Images ===
 
=== Printing Images ===
MIPAV offers the following printing command '''File &gt; Capture and Print Image'''. This command calls the Print dialog box. Using this dialog you can set up a printer (to do it press the Properties button) or a file for printing (using the Print to File option), select the print copies and print range (all pages, current page, or selected pages).<br />
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MIPAV offers the following printing command '''File &gt; Capture and Print Image'''. This command calls the Print dialog box. Using this dialog you can set up a printer (to do it press the Properties button) or a file for printing (using the Print to File option), select the print copies and print range (all pages, current page, or selected pages).
'''To print an image with its current options:'''<br />
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Choose File &gt; Capture and Print Image, and click OK.<br />
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'''To print an image with its current options:''' choose File &gt; Capture and Print Image, and click OK.
'''To set printer and page setup options:'''<br />
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1 Choose File &gt; Capture and Print Image.<br />
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'''To set printer and page setup options:'''  
2 Select an installed printer from the pop-up list at the top of the dialog box.<br />
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<ol>
3 Set additional options, such as paper size and layout, as desired. The available options depend on your printer, print drivers, and operating system.<br />
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<li> Choose File &gt; Capture and Print Image.</li>
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<li>  Select an installed printer from the pop-up list at the top of the dialog box.</li>
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<li> Set additional options, such as paper size and layout, as desired. The available options depend on your printer, print drivers, and operating system.</li>
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</ol>
  
 
== See also: ==
 
== See also: ==
 +
*[[Supported Formats]]
 +
**[[Supported Formats | Graphical and file formats supported by MIPAV]]
 +
**[[Image formats descriptions | Image formats' descriptions]]
 +
**[[FAQ: Understanding Image Basics#FilesExtensions | Image files supported by MIPAV]]
  
 
*[[ImageJ | Working with ImageJ]]
 
*[[ImageJ | Working with ImageJ]]
 +
 
*[[Customizing MIPAV]]
 
*[[Customizing MIPAV]]
**[[To show the splash screen |MIPAV splash screen ]]
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**[[Customizing MIPAV#MipavOptions | MIPAV Options dialog box]]
**[[Choosing the default file types to display or save]]  
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**[[Customizing MIPAV#SplashScreen | Showing and hiding the splash screen on start-up]]
*[[Choosing the default file types to display or save|Quitting MIPAV]]
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**[[Customizing MIPAV#DebuggingMipav | Debugging MIPAV]]
*[[Supported Formats | Graphical and file formats supported by MIPAV]]
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**[[Customizing MIPAV#ActionsHistory | Saving a history of actions on images]]
**[[Image formats descriptions | Image formats' descriptions]]
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**[[Customizing MIPAV#DefaultFileTypes | Choosing the default file types to display or save]]
 +
**[[Customizing MIPAV#AddingShortcuts | Adding Shortcuts]]
 +
 
 +
*[[Quitting MIPAV]]
 +
 
 
[[Category:Help]]
 
[[Category:Help]]
 +
[[Category:Getting started]]

Latest revision as of 19:35, 25 April 2012

Saving and printing images

This section explains how to save images to the same format (as when opened) or to a different format. It also shows how to print images. In addition, it explains how to save an image as a TIFF file.

Saving images to the same format

To save an image file in the same format (as when opened)

The Save dialog box
  1. In the MIPAV window, do one of the following:
  • Click the Save Image icon or use the Ctrl+S combination of keys.
  • Select File > Save Image.
  • The Save dialog box appears.
  • In the dialog box, type the name of the file in File name and click Save.
  • Note: If you prefer for MIPAV to use the style of Open and Save dialog boxes that are used by the operating system (e.g., Microsoft Windows, Unix, or Apple) on your computer, read the section on "Using platform-specific Open and Save dialog boxes".

    Capturing images as TIFF(RGB) files

    Capturing images and/or image regions

    MIPAV allows you to capture entire images or portions of images as RGB TIFF files.

    To capture an image: Select File > Capture image to TIFF(RGB) in the MIPAV window. The Capture Screen dialog box opens.

    To capture only a portion of an image: Select Region, then draw a rectangle with the mouse around the region in the image you want to save. Click OK. The Save dialog box opens. Type the name of the file in File Name, and select the TIFF type of file. Click Save. The region is saved under the specified file name.

    To capture the entire image: Select Window, then click OK. The Save dialog box opens. Follow the instructions provided by the dialog box to save the image in TIFF format.

    To display the region in a separate window rather than save it, select Display in Window Instead of Save. The selected region appears in a separate window.

    To display the image in a separate window rather than save it, select Display in Window Instead of Save. The entire image appears in a separate window.

    Saving images as

    MIPAV uses the file extension to save images into various formats. Thus, saving an image with the extension of TIFF causes the image to be saved as a TIFF image. Saving an image with the extension of IMG causes the image to be saved as an Analyze image. See Supported Formats for file extensions supported by MIPAV.

    To save images as RGB TIFF files

    1. Select File > Save as in the MIPAV window. The Save Image as dialog box appears.
    2. Type the name of the image in File name. Make sure you add .tiff as the extension.
    3. Click Save. MIPAV saves the file as a TIFF file under the name you specified.

    To save images to MINC format

    1. Select File > Save As.The Save Image as dialog box appears.
    2. Type the name of the file in File name. Make sure you add .mnc as the extension.
    3. The Attributes to Save dialog box appears.
    4. Complete the text boxes with the appropriate information. Note that the x, y, and z values differ from DICOM.
    5. Click Save. MIPAV saves the image to MINC format.

    MINC Attributes of the Save dialog box

    MINC Attributes to Save dialog box
    Comparison of MINC and DICOM image orientation

    Image orientation: Specify the image orientation here if need. Note that, often the proper value is already entered in the dialog box. Then use the appropriate list boxes to specify the X, Y and Z axis orientation.

    OK - Saves the selected image based on your choices in this dialog box.

    Cancel - Disregards changes you made in this dialog box and closes the dialog box.

    Saving images to XML format

    To record a history of actions that were performed on images, you should save the images to MIPAV XML format. When you save images to XML format, MIPAV creates two files for each image: a RAW file, which contains image data, and an XML file. The XML file includes image attributes, such as action history. You can view the attributes of an image by selecting Image > Attributes > Edit Attributes or by viewing the .xml file using a text editor or an internet browser.

    To save images to XML format

    1. Select File > Save as. The Save Image as dialog box opens.
    2. Accept the name currently in File name or type a new name. Make sure you add .xml as the extension.
    3. Click Save. MIPAV saves the file under the name and extension you specified and begins, from this point on, recording a history of actions performed on the image.

    Saving images to another format or renaming images

    The Save As dialog box

    To save images to format different from the original file:

    1. Select File > Save as.The Save Image as dialog box appears.
    2. 2 Type the new name in File name. To save the file in a different format, change the file extension.
    3. Click Save. MIPAV saves the file under the name and extension you specified.

    To rename images:

    1. Select File > Save as. The Save Image as dialog appears.
    2. Type the new name in File name. Either keep the extension already specified or change it to another file type.
    3. Click Save. MIPAV saves the file under the name and extension you specified.

    Printing Images

    MIPAV offers the following printing command File > Capture and Print Image. This command calls the Print dialog box. Using this dialog you can set up a printer (to do it press the Properties button) or a file for printing (using the Print to File option), select the print copies and print range (all pages, current page, or selected pages).

    To print an image with its current options: choose File > Capture and Print Image, and click OK.

    To set printer and page setup options:

    1. Choose File > Capture and Print Image.
    2. Select an installed printer from the pop-up list at the top of the dialog box.
    3. Set additional options, such as paper size and layout, as desired. The available options depend on your printer, print drivers, and operating system.

    See also: