Difference between revisions of "Muscle Segmentation problems at UCSD"
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| − | A list of problems found in MuscleSegmentation by UCSD using java1.5.0_13 and 12 | + | |
| + | == Problems with MIPAV 4.4.1 and java 1.6.0 == | ||
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| + | None reported yet, note that MuscleSegmentation is now MuscleSegmentation441 from [http://dcb.cit.nih.gov/~senseneyj/code/muscleSeg.html here]. | ||
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| + | == Problems with MIPAV 4.1.2 and java 1.5.0 == | ||
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| + | A list of problems found in MuscleSegmentation by UCSD using java1.5.0_13 and 12 - note that MuscleSegmentation now requires java1.6 | ||
*<strike>Statistics take longer to compute in 4.4 than 4.1 (specifically 4.1.2 and 4.1.10 had reasonable speeds)</strike> - fixed, also works well in VOI conversion | *<strike>Statistics take longer to compute in 4.4 than 4.1 (specifically 4.1.2 and 4.1.10 had reasonable speeds)</strike> - fixed, also works well in VOI conversion | ||
| − | *<strike>In custom pane, VOIs can only be added in first pane (both before and after a profile has been loaded</strike> fixed, | + | *<strike>In custom pane, VOIs can only be added in first pane (both before and after a profile has been loaded</strike> fixed, works with 1.6 |
*<strike>Statistics errors</strike>, <strike>need sample data</strike> - fixed, update problem solved | *<strike>Statistics errors</strike>, <strike>need sample data</strike> - fixed, update problem solved | ||
*<strike>GUI shows up as black on Mac, does not appear to happen with other MIPAV plugins</strike> - fixed | *<strike>GUI shows up as black on Mac, does not appear to happen with other MIPAV plugins</strike> - fixed | ||
Revision as of 19:36, 26 May 2010
Problems with MIPAV 4.4.1 and java 1.6.0
None reported yet, note that MuscleSegmentation is now MuscleSegmentation441 from here.
Problems with MIPAV 4.1.2 and java 1.5.0
A list of problems found in MuscleSegmentation by UCSD using java1.5.0_13 and 12 - note that MuscleSegmentation now requires java1.6
Statistics take longer to compute in 4.4 than 4.1 (specifically 4.1.2 and 4.1.10 had reasonable speeds)- fixed, also works well in VOI conversionIn custom pane, VOIs can only be added in first pane (both before and after a profile has been loadedfixed, works with 1.6Statistics errors,need sample data- fixed, update problem solvedGUI shows up as black on Mac, does not appear to happen with other MIPAV plugins- fixed
Features
unit consideration- added, functionaloutput per-slice- added, functional
No problems found, more testing needed:
Overwriting VOIs, check that file has actually been written over- tested
Mipav features:
Default VOI thickness of two, unable to change system-wide- fixed- Alt tracing:
Unusual VOI flashingfixed in newer versions of MIPAV- Feature: VOI tracing without edge detection? working on new VOIs
Open all VOIs from..., if folder is selected, open button should not disable- fixed
