Difference between revisions of "Autocovariance Coefficients"

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This page is a stub.
 
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Autocovariance is a measure of the degree to which the outcome of the function f (T + t) at coordinates (T+ t) depends upon the outcome of f(T) at coordinates t. It provides a description of the texture or a nature of the noise structure
  
Refer to [http://mipav.cit.nih.gov/documentation/HTML%20Algorithms/AutoCovarianceCoefficients.html MIPAV HTML help]
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== Background ==
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In statistics, given a real stochastic process f(t), the auto-covariance is simply the covariance of the signal against a time-shifted version of itself. If each state of the series has a mean:  
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<math>
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E=[f(T)]=\mu_T
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</math>
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== Notes ==
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An auto-covariance function, which falls rapidly as a function of t, indicates that the resultant noise is in actual fact independent except at short separated distances, providing an appearance of 'sharp' noise.  
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An auto-covariance function, which falls off slowly and smoothly as a function of t, indicates that the noise is highly correlated. At a given point, a positive value of the auto-covariance means that the noise tends to be of the same sign, while a negative value indicates that the noise tends to be of the opposite sign.  
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In short, the amplitude of the auto-covariance at zero displacement provides a measure of the noise magnitude, while the shape the auto-covariance can be used to describe the nature of noise.
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== Image types ==
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Color and black and white 3D and 4D images.  
  
 
<div id="ApplyingAutocovarianceCoefficients"><div>
 
<div id="ApplyingAutocovarianceCoefficients"><div>
 
=== Applying Autocovariance Coefficients ===
 
=== Applying Autocovariance Coefficients ===
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To use this algorithm, do the following:
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*Select Algorithms > AutoCovariance Coefficients in the MIPAV window. The AutoCovariance Coefficients dialog box appears.
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*Click OK. The algorithm begins to run, and a status bar appears with the status. When the algorithm finishes running, the progress bar disappears, and the results replace the original image.
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== References ==
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Refer to [http://mipav.cit.nih.gov/documentation/HTML%20Algorithms/AutoCovarianceCoefficients.html MIPAV HTML help]
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Digital Image Processing, Second Edition by Rafael C. Gonzalez and Richard C. Woods, Prentice-Hall, Inc., 2002, pp. 205 - 208 and pp. 414-417.
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"Two-photon image correlation spectroscopy and image cross-correlation spectroscopy" by P. W. Wiseman, J.A. Squier, M.H. Ellisman, and K.R. Wilson, Journal of Microscopy, Vol. 200. Pt. 1, October 2000, pp. 14-25.
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"Quantitation of Membrane Receptor Distributions by Image Correlation Spectroscopy: Concept and Application" by Nils O. Petersen, Pia L. Hoddelius, Paul W. Wiseman, Olle Seger, and Karl-Eric Magnusson, Biophysical Journal, Volume 65, September, 1993, pp. 1135-1146.
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"Image cross-correlation spectroscopy: A new experimental bipohysical approach to measurement of slow diffusion of fluorescent molecules" by Mamta Srivastava & Nils O. Petersen, Methods in Cell Science, Vol. 18, March, 1996, pp. 47-54.
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"Analysis of recorded image noise in nuclear medicine" by Benjamin M. W. Tsui, Robert N. Beck, Kunio Doi and Charles E. Metz, Phys. Med. Biol., 1981, Vol. 26. No. 5, 883-902. Printed in Great Britain.
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[[Category:Help:Stub]]
 
[[Category:Help:Stub]]
 
[[Category:Help:Algorithms]]
 
[[Category:Help:Algorithms]]

Revision as of 15:52, 6 August 2012

This page is a stub.

Autocovariance is a measure of the degree to which the outcome of the function f (T + t) at coordinates (T+ t) depends upon the outcome of f(T) at coordinates t. It provides a description of the texture or a nature of the noise structure

Background

In statistics, given a real stochastic process f(t), the auto-covariance is simply the covariance of the signal against a time-shifted version of itself. If each state of the series has a mean:

<math> E=[f(T)]=\mu_T </math>

Notes

An auto-covariance function, which falls rapidly as a function of t, indicates that the resultant noise is in actual fact independent except at short separated distances, providing an appearance of 'sharp' noise.

An auto-covariance function, which falls off slowly and smoothly as a function of t, indicates that the noise is highly correlated. At a given point, a positive value of the auto-covariance means that the noise tends to be of the same sign, while a negative value indicates that the noise tends to be of the opposite sign.

In short, the amplitude of the auto-covariance at zero displacement provides a measure of the noise magnitude, while the shape the auto-covariance can be used to describe the nature of noise.

Image types

Color and black and white 3D and 4D images.

Applying Autocovariance Coefficients

To use this algorithm, do the following:

  • Select Algorithms > AutoCovariance Coefficients in the MIPAV window. The AutoCovariance Coefficients dialog box appears.
  • Click OK. The algorithm begins to run, and a status bar appears with the status. When the algorithm finishes running, the progress bar disappears, and the results replace the original image.


References

Refer to MIPAV HTML help

Digital Image Processing, Second Edition by Rafael C. Gonzalez and Richard C. Woods, Prentice-Hall, Inc., 2002, pp. 205 - 208 and pp. 414-417.

"Two-photon image correlation spectroscopy and image cross-correlation spectroscopy" by P. W. Wiseman, J.A. Squier, M.H. Ellisman, and K.R. Wilson, Journal of Microscopy, Vol. 200. Pt. 1, October 2000, pp. 14-25.

"Quantitation of Membrane Receptor Distributions by Image Correlation Spectroscopy: Concept and Application" by Nils O. Petersen, Pia L. Hoddelius, Paul W. Wiseman, Olle Seger, and Karl-Eric Magnusson, Biophysical Journal, Volume 65, September, 1993, pp. 1135-1146.

"Image cross-correlation spectroscopy: A new experimental bipohysical approach to measurement of slow diffusion of fluorescent molecules" by Mamta Srivastava & Nils O. Petersen, Methods in Cell Science, Vol. 18, March, 1996, pp. 47-54.

"Analysis of recorded image noise in nuclear medicine" by Benjamin M. W. Tsui, Robert N. Beck, Kunio Doi and Charles E. Metz, Phys. Med. Biol., 1981, Vol. 26. No. 5, 883-902. Printed in Great Britain.