TRE Scripts

• "despot_TR double 5.0", • "irspgr_TR double 5.0", • "irspgr_Ky double 80.0", • "irspgr_FA double 5.0", • "max_T1 double 5000.0", • "max_Mo double 10000.0",

• "despot_FA list_double 4.0,19.0", • "irspgr_Tr list_double 715.0,805.0", • "irspgr_TI list_double 315.0,405.0",

• "spgr_Data list_double 15.0,13.0", • "irspgr_Data list_double 3.0,7.0",

• "scale double 0.0", • "point_Scale double 0.0", • "scale_Increment double 0.0",

• "spgr_Image_Index list_int 3,1", • "irspgr_Image_Index list_int 0,2", • "b1_Image_Index int 0",

• "angle_Increment double 0.0", • "Nsa int 2", • "Nti int 2",

• "max_Angle double 20.0", • "smooth_B1_Field boolean true",

• "perform_Straight_DESPOT1 boolean false", • "perform_DESPOT1_with_PreCalculatedB1Map boolean false", • "perform_DESPOT1_HIFI boolean true",

• "double_Inversion boolean true", • "single_Inversion boolean false",

• "ge_Scanner boolean true", • "siemens_Scanner boolean false", • "three_T_Field boolean true", • "one_five_TField boolean false", • "calculate_T1 boolean true", • "show_B1_Map boolean true", • "calculate_Mo boolean false", • "invert_T1_to_R1 boolean false", • "use_Weights boolean true", • "uniform_Angle_Spacing boolean true", • "upper_Left_Corner boolean true", • "upper_Right_Corner boolean false", • "lower_Left_Corner boolean false", • "lower_Right_Corner boolean false", • "use_Smart_Thresholding boolean false", • "use_Hard_Thresholding boolean true", • "noise_Scale float 4.0", • "hard_Noise_Threshold float 2.0", • "number_of_input_images int 4",

• "despot1-tr77_fa5_ir350 ext_image $image3", • "despot1-tr77_fa19 ext_image $image4", • "despot1-tr77_fa5_ir450 ext_image $image5", • "despot1-tr77_fa4 ext_image $image6",

• "do_output_new_image boolean true")