Difference between revisions of "TRE Scripts"

From MIPAV
Jump to: navigation, search
(Created page with 'Sample Script: DespotT1( "despot_TR double 5.0", "irspgr_TR double 5.0", "irspgr_Ky double 80.0", "irspgr_FA double 5.0", "max_T1 double 5000.0", "max_Mo double 10000.0", ...')
 
Line 1: Line 1:
Sample Script:
+
"despot_TR double 5.0",  
DespotT1(
+
"irspgr_TR double 5.0",  
"despot_TR double 5.0",  
+
"irspgr_Ky double 80.0",  
"irspgr_TR double 5.0",  
+
"irspgr_FA double 5.0",  
"irspgr_Ky double 80.0",  
+
"max_T1 double 5000.0",  
"irspgr_FA double 5.0",  
+
"max_Mo double 10000.0",  
"max_T1 double 5000.0",  
+
"max_Mo double 10000.0",  
+
  
"despot_FA list_double 4.0,19.0",  
+
"despot_FA list_double 4.0,19.0",  
"irspgr_Tr list_double 715.0,805.0",  
+
"irspgr_Tr list_double 715.0,805.0",  
"irspgr_TI list_double 315.0,405.0",  
+
"irspgr_TI list_double 315.0,405.0",  
  
"spgr_Data list_double 15.0,13.0",  
+
"spgr_Data list_double 15.0,13.0",  
"irspgr_Data list_double 3.0,7.0",  
+
"irspgr_Data list_double 3.0,7.0",  
  
"scale double 0.0",  
+
"scale double 0.0",  
"point_Scale double 0.0",  
+
"point_Scale double 0.0",  
"scale_Increment double 0.0",  
+
"scale_Increment double 0.0",  
  
"spgr_Image_Index list_int 3,1",  
+
"spgr_Image_Index list_int 3,1",  
"irspgr_Image_Index list_int 0,2",  
+
"irspgr_Image_Index list_int 0,2",  
"b1_Image_Index int 0",  
+
"b1_Image_Index int 0",  
  
"angle_Increment double 0.0",  
+
"angle_Increment double 0.0",  
"Nsa int 2",  
+
"Nsa int 2",  
"Nti int 2",  
+
"Nti int 2",  
  
"max_Angle double 20.0",  
+
"max_Angle double 20.0",  
"smooth_B1_Field boolean true",  
+
"smooth_B1_Field boolean true",  
  
"perform_Straight_DESPOT1 boolean false",  
+
"perform_Straight_DESPOT1 boolean false",  
"perform_DESPOT1_with_PreCalculatedB1Map boolean false",  
+
"perform_DESPOT1_with_PreCalculatedB1Map boolean false",  
"perform_DESPOT1_HIFI boolean true",  
+
"perform_DESPOT1_HIFI boolean true",  
  
"double_Inversion boolean true",  
+
"double_Inversion boolean true",  
"single_Inversion boolean false",  
+
"single_Inversion boolean false",  
  
"ge_Scanner boolean true",  
+
"ge_Scanner boolean true",  
"siemens_Scanner boolean false",  
+
"siemens_Scanner boolean false",  
"three_T_Field boolean true",  
+
"three_T_Field boolean true",  
"one_five_TField boolean false",  
+
"one_five_TField boolean false",  
"calculate_T1 boolean true",  
+
"calculate_T1 boolean true",  
"show_B1_Map boolean true",  
+
"show_B1_Map boolean true",  
"calculate_Mo boolean false",  
+
"calculate_Mo boolean false",  
"invert_T1_to_R1 boolean false",  
+
"invert_T1_to_R1 boolean false",  
"use_Weights boolean true",  
+
"use_Weights boolean true",  
"uniform_Angle_Spacing boolean true",
+
"uniform_Angle_Spacing boolean true",
"upper_Left_Corner boolean true",  
+
"upper_Left_Corner boolean true",  
"upper_Right_Corner boolean false",  
+
"upper_Right_Corner boolean false",  
"lower_Left_Corner boolean false",  
+
"lower_Left_Corner boolean false",  
"lower_Right_Corner boolean false",  
+
"lower_Right_Corner boolean false",  
"use_Smart_Thresholding boolean false",  
+
"use_Smart_Thresholding boolean false",  
"use_Hard_Thresholding boolean true",  
+
"use_Hard_Thresholding boolean true",  
"noise_Scale float 4.0",  
+
"noise_Scale float 4.0",  
"hard_Noise_Threshold float 2.0",  
+
"hard_Noise_Threshold float 2.0",  
"number_of_input_images int 4",  
+
"number_of_input_images int 4",  
  
"despot1-tr77_fa5_ir350 ext_image $image3",  
+
"despot1-tr77_fa5_ir350 ext_image $image3",  
"despot1-tr77_fa19 ext_image $image4",  
+
"despot1-tr77_fa19 ext_image $image4",  
"despot1-tr77_fa5_ir450 ext_image $image5",  
+
"despot1-tr77_fa5_ir450 ext_image $image5",  
"despot1-tr77_fa4 ext_image $image6",  
+
"despot1-tr77_fa4 ext_image $image6",  
  
"do_output_new_image boolean true")
+
"do_output_new_image boolean true")

Revision as of 21:13, 20 April 2010

• "despot_TR double 5.0", • "irspgr_TR double 5.0", • "irspgr_Ky double 80.0", • "irspgr_FA double 5.0", • "max_T1 double 5000.0", • "max_Mo double 10000.0",

• "despot_FA list_double 4.0,19.0", • "irspgr_Tr list_double 715.0,805.0", • "irspgr_TI list_double 315.0,405.0",

• "spgr_Data list_double 15.0,13.0", • "irspgr_Data list_double 3.0,7.0",

• "scale double 0.0", • "point_Scale double 0.0", • "scale_Increment double 0.0",

• "spgr_Image_Index list_int 3,1", • "irspgr_Image_Index list_int 0,2", • "b1_Image_Index int 0",

• "angle_Increment double 0.0", • "Nsa int 2", • "Nti int 2",

• "max_Angle double 20.0", • "smooth_B1_Field boolean true",

• "perform_Straight_DESPOT1 boolean false", • "perform_DESPOT1_with_PreCalculatedB1Map boolean false", • "perform_DESPOT1_HIFI boolean true",

• "double_Inversion boolean true", • "single_Inversion boolean false",

• "ge_Scanner boolean true", • "siemens_Scanner boolean false", • "three_T_Field boolean true", • "one_five_TField boolean false", • "calculate_T1 boolean true", • "show_B1_Map boolean true", • "calculate_Mo boolean false", • "invert_T1_to_R1 boolean false", • "use_Weights boolean true", • "uniform_Angle_Spacing boolean true", • "upper_Left_Corner boolean true", • "upper_Right_Corner boolean false", • "lower_Left_Corner boolean false", • "lower_Right_Corner boolean false", • "use_Smart_Thresholding boolean false", • "use_Hard_Thresholding boolean true", • "noise_Scale float 4.0", • "hard_Noise_Threshold float 2.0", • "number_of_input_images int 4",

• "despot1-tr77_fa5_ir350 ext_image $image3", • "despot1-tr77_fa19 ext_image $image4", • "despot1-tr77_fa5_ir450 ext_image $image5", • "despot1-tr77_fa4 ext_image $image6",

• "do_output_new_image boolean true")