Data Upload module

From MIPAV
Revision as of 15:35, 24 July 2013 by Olga Vovk (Talk | contribs)

Jump to: navigation, search

The Data Upload module helps researches to upload their data to the data repository. The data should be uploaded in the form of a submission package (XML) that has a unique identifier - a submission ticket (XML).

If you don't have a submission package ready, use the Data Validation module to create it. The module will also validate your data and make sure that they conform to the required format and range values defined in the Data Dictionary.

If you need to submit imaging data to the repository,

  1. Use the Imaging data submission and validation module to create the imaging submission set.
  2. Use the Data Validation module to re-validate the data and create a submission ticket and submission package.

System requirements

The most recent version of Java Runtime Environment (JRE) (6 or 7) is required in order to run the Data Upload module.

Running the Data Upload module

The Data Upload module runs locally on your machine. In order to launch the module, navigate to the Data Repository > Upload Data page and click the Launch the Upload Tool link.

Note: the most recent version of Java Runtime Environment (JRE) (6 or 7) is required in order to run the module. Make sure your computer has it installed.

  • Click Launch the Upload Tool. First, the Java Runtime Environment window appears, and then the EULE Agreement window appears. Read the agreement and click Accept if you agree.
  • The Upload Manager window appears.
  1. In the Upload Manager window,
    1. Use the drop-down Study Name menu to select the study name.
    2. Navigate to the Submission Ticket menu and use the Browse button to select the submission ticket file (XML) on your computer.
    3. Navigate to the Dataset Name menu and type in a unique name for your dataset. Make it a meaningful name, easy to search for.
    4. Press Start Submission Upload.
    5. The submission package appears in the Upload Queue table. In the Upload Queue table you can watch the progress of your submission(s). For successful submissions the status "Success" appears in the Status column.


   Using the dropdown menu, select the Study to which you wish to upload data.
   Click Browse next to Submission Ticket (XML)
   Navigate to location on your computer of the working directory where the file for submission is located. Select the file, and then click Open
   Enter a Dataset Name
       Note: The name must be unique to the selected Study.
   Select the Upload button
       Note: Screen will update as file(s) are being uploaded to the system. If Upload is successful, the Status will be designated as Completed


See also