Difference between revisions of "Changing Image Datasets Using MIPAV Utilities"

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<div style="font-style: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 24pt; text-align: right; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline">'''<font color="#000000"> 11 <br /></font>'''</div><div style="font-style: normal; margin-bottom: 600pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: right; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline">'''<font color="#000000"> Changing Image Datasets Using MIPAV Utilities <span style="font-style: normal; text-decoration: none; text-transform: none; vertical-align: baseline">'''<font color="#000000">. . .</font>'''</span><br /></font>'''</div><div style="font-style: normal; margin-bottom: 6pt; margin-left: 6pt; margin-right: 6pt; margin-top: 6pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline">'''<font color="#0023a9"> In this chapter<br /></font>'''</div><div style="font-style: normal; font-weight: normal; margin-bottom: 1pt; margin-left: 18pt; margin-right: 6pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: -12pt; text-transform: none; vertical-align: baseline"><font color="#0023a9"> [MIPAV_Utilities.html#1191929 "Standard tasks provided through commands on the Utilities menu" on page 401]<br /></font></div><div style="font-style: normal; font-weight: normal; margin-bottom: 1pt; margin-left: 18pt; margin-right: 6pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: -12pt; text-transform: none; vertical-align: baseline"><font color="#0023a9"> [MIPAV_Utilities.html#1006375 "Recording utilities usage with the history feature" on page 404]<br /></font></div><div style="font-style: normal; font-weight: normal; margin-bottom: 1pt; margin-left: 18pt; margin-right: 6pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: -12pt; text-transform: none; vertical-align: baseline"><font color="#0023a9"> [MIPAV_Utilities.html#1189489 "4 D tools" on page 405]<br /></font></div><div style="font-style: normal; font-weight: normal; margin-bottom: 1pt; margin-left: 18pt; margin-right: 6pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: -12pt; text-transform: none; vertical-align: baseline"><font color="#0023a9"> [MIPAV_Utilities.html#1203929 "Adding image margins" on page 412]<br /></font></div><div style="font-style: normal; font-weight: normal; margin-bottom: 1pt; margin-left: 18pt; margin-right: 6pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: -12pt; text-transform: none; vertical-align: baseline"><font color="#0023a9"> [MIPAV_Utilities.html#1006484 "Copying images using the Clone command" on page 414]<br /></font></div><div style="font-style: normal; font-weight: normal; margin-bottom: 1pt; margin-left: 18pt; margin-right: 6pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: -12pt; text-transform: none; vertical-align: baseline"><font color="#0023a9"> [MIPAV_Utilities.html#1165547 "Converting image datasets to different data types" on page 414]<br /></font></div><div style="font-style: normal; font-weight: normal; margin-bottom: 1pt; margin-left: 18pt; margin-right: 6pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: -12pt; text-transform: none; vertical-align: baseline"><font color="#0023a9"> [MIPAV_Utilities.html#1169542 "Correcting image spacing" on page 423]<br /></font></div><div style="font-style: normal; font-weight: normal; margin-bottom: 1pt; margin-left: 18pt; margin-right: 6pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: -12pt; text-transform: none; vertical-align: baseline"><font color="#0023a9"> [MIPAV_Utilities.html#1172273 "Cropping images" on page 431]<br /></font></div><div style="font-style: normal; font-weight: normal; margin-bottom: 1pt; margin-left: 18pt; margin-right: 6pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: -12pt; text-transform: none; vertical-align: baseline"><font color="#0023a9"> [MIPAV_Utilities.html#1173255 "Masking (filling) images" on page 434]<br /></font></div><div style="font-style: normal; font-weight: normal; margin-bottom: 1pt; margin-left: 18pt; margin-right: 6pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: -12pt; text-transform: none; vertical-align: baseline"><font color="#0023a9"> [MIPAV_Utilities.html#1173868 "Flipping images" on page 436]<br /></font></div><div style="font-style: normal; font-weight: normal; margin-bottom: 1pt; margin-left: 18pt; margin-right: 6pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: -12pt; text-transform: none; vertical-align: baseline"><font color="#0023a9"> [MIPAV_Utilities.html#1207373 "Image Calculator" on page 438] and [MIPAV_Utilities.html#1296428 page 451]<br /></font></div><div style="font-style: normal; font-weight: normal; margin-bottom: 1pt; margin-left: 18pt; margin-right: 6pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: -12pt; text-transform: none; vertical-align: baseline"><font color="#0023a9"> [MIPAV_Utilities.html#1177106 "Image Math" on page 453]<br /></font></div><div style="font-style: normal; font-weight: normal; margin-bottom: 1pt; margin-left: 18pt; margin-right: 6pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: -12pt; text-transform: none; vertical-align: baseline"><font color="#0023a9"> [MIPAV_Utilities.html#1180508 "Inverting the image" on page 457]<br /></font></div><div style="font-style: normal; font-weight: normal; margin-bottom: 1pt; margin-left: 18pt; margin-right: 6pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: -12pt; text-transform: none; vertical-align: baseline"><font color="#0023a9"> [MIPAV_Utilities.html#1180988 "Matching images" on page 458]<br /></font></div><div style="font-style: normal; font-weight: normal; margin-bottom: 1pt; margin-left: 18pt; margin-right: 6pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: -12pt; text-transform: none; vertical-align: baseline"><font color="#0023a9"> [MIPAV_Utilities.html#1223070 "Maximum Intensity Projection" on page 461]<br /></font></div><div style="font-style: normal; font-weight: normal; margin-bottom: 1pt; margin-left: 18pt; margin-right: 6pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: -12pt; text-transform: none; vertical-align: baseline"><font color="#0023a9"> [MIPAV_Utilities.html#1182119 "Adding noise to images" on page 464]<br /></font></div><div style="font-style: normal; font-weight: normal; margin-bottom: 1pt; margin-left: 18pt; margin-right: 6pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: -12pt; text-transform: none; vertical-align: baseline"><font color="#0023a9"> [MIPAV_Utilities.html#1204487 "Pad" on page 467]<br /></font></div><div style="font-style: normal; font-weight: normal; margin-bottom: 1pt; margin-left: 18pt; margin-right: 6pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: -12pt; text-transform: none; vertical-align: baseline"><font color="#0023a9"> [MIPAV_Utilities.html#1182469 "Quantify Mask" on page 468]<br /></font></div><div style="font-style: normal; font-weight: normal; margin-bottom: 1pt; margin-left: 18pt; margin-right: 6pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: -12pt; text-transform: none; vertical-align: baseline"><font color="#0023a9"> [MIPAV_Utilities.html#1184590 "Replacing pixel/voxel value in images" on page 471]<br /></font></div><div style="font-style: normal; font-weight: normal; margin-bottom: 1pt; margin-left: 18pt; margin-right: 6pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: -12pt; text-transform: none; vertical-align: baseline"><font color="#0023a9"> [MIPAV_Utilities.html#1185153 "Rotating images" on page 473]<br /></font></div><div style="font-style: normal; font-weight: normal; margin-bottom: 1pt; margin-left: 18pt; margin-right: 6pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: -12pt; text-transform: none; vertical-align: baseline"><font color="#0023a9"> [MIPAV_Utilities.html#1183533 "Slice tools" on page 475]<br /></font></div><div style="font-style: normal; font-weight: normal; margin-bottom: 1pt; margin-left: 18pt; margin-right: 6pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: -12pt; text-transform: none; vertical-align: baseline"><font color="#0023a9"> [MIPAV_Utilities.html#1189070 "Inserting slices into image datasets" on page 481]<br /></font></div><div style="font-style: normal; font-weight: normal; margin-bottom: 1pt; margin-left: 6pt; margin-right: 6pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#0023a9"> [MIPAV_Utilities.html#1201306 "Subtract VOI Background" on page 488]<br /></font></div><div style="font-style: normal; font-weight: normal; margin-bottom: 0pt; margin-left: 0pt; margin-right: 0pt; margin-top: 0pt; text-align: left; text-decoration: none; text-indent: 0pt; text-transform: none; vertical-align: baseline"><font color="#000000"> <br /></font></div>
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<a name="1005641"> </a>Changing Image Datasets Using MIPAV Utilities  <span style="color: #000000;  font-style: normal; font-weight: bold; text-decoration: none; text-transform: none; vertical-align: baseline">. . .</span><br>
 
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<a name="1191548"> </a><a href="MIPAV_Utilities.html#1169542">&quot;Correcting image spacing&quot; on page&#160;423</a><br>
 
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<a name="1191633"> </a><a href="MIPAV_Utilities.html#1180508">&quot;Inverting the image&quot; on page&#160;457</a><br>
 
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<a name="1191663"> </a><a href="MIPAV_Utilities.html#1184590">&quot;Replacing pixel/voxel value in images&quot; on page&#160;471</a><br>
 
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[[Standard tasks provided through commands on the Utilities menu]]
 
[[Standard tasks provided through commands on the Utilities menu]]

Revision as of 15:36, 15 February 2012

11
Changing Image Datasets Using MIPAV Utilities . . .
In this chapter
[MIPAV_Utilities.html#1191929 "Standard tasks provided through commands on the Utilities menu" on page 401]
[MIPAV_Utilities.html#1006375 "Recording utilities usage with the history feature" on page 404]
[MIPAV_Utilities.html#1189489 "4 D tools" on page 405]
[MIPAV_Utilities.html#1203929 "Adding image margins" on page 412]
[MIPAV_Utilities.html#1006484 "Copying images using the Clone command" on page 414]
[MIPAV_Utilities.html#1165547 "Converting image datasets to different data types" on page 414]
[MIPAV_Utilities.html#1169542 "Correcting image spacing" on page 423]
[MIPAV_Utilities.html#1172273 "Cropping images" on page 431]
[MIPAV_Utilities.html#1173255 "Masking (filling) images" on page 434]
[MIPAV_Utilities.html#1173868 "Flipping images" on page 436]
[MIPAV_Utilities.html#1207373 "Image Calculator" on page 438] and [MIPAV_Utilities.html#1296428 page 451]
[MIPAV_Utilities.html#1177106 "Image Math" on page 453]
[MIPAV_Utilities.html#1180508 "Inverting the image" on page 457]
[MIPAV_Utilities.html#1180988 "Matching images" on page 458]
[MIPAV_Utilities.html#1223070 "Maximum Intensity Projection" on page 461]
[MIPAV_Utilities.html#1182119 "Adding noise to images" on page 464]
[MIPAV_Utilities.html#1204487 "Pad" on page 467]
[MIPAV_Utilities.html#1182469 "Quantify Mask" on page 468]
[MIPAV_Utilities.html#1184590 "Replacing pixel/voxel value in images" on page 471]
[MIPAV_Utilities.html#1185153 "Rotating images" on page 473]
[MIPAV_Utilities.html#1183533 "Slice tools" on page 475]
[MIPAV_Utilities.html#1189070 "Inserting slices into image datasets" on page 481]
[MIPAV_Utilities.html#1201306 "Subtract VOI Background" on page 488]


Standard tasks provided through commands on the Utilities menu

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