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This special page shows all uploaded files.
| Date | Name | Thumbnail | Size | User | Description | Versions |
|---|---|---|---|---|---|---|
| 14:36, 8 November 2012 | TransformOptionsBox.png (file) |  |
23 KB | Transform dialog box - the Options box | 1 | |
| 14:35, 8 November 2012 | TransformationOptions.jpg (file) |  |
340 KB | 2 | ||
| 14:32, 8 November 2012 | TransformOptions.png (file) |  |
5 KB | Transformation dialog box - options | 1 | |
| 17:25, 7 November 2012 | ImageOriginCoordinates.png (file) |  |
4 KB | 2 | ||
| 14:46, 7 November 2012 | ImageOrigin.png (file) |  |
8 KB | 2 | ||
| 14:36, 7 November 2012 | RightHandCoordinateSystem.jpg (file) |  |
57 KB | Transform dialog box - right hand coordinate system | 1 | |
| 14:23, 7 November 2012 | TransformUserDefinedTransformMatrixOptions.jpg (file) |  |
192 KB | Transform dialog box - User Defined Transform Matrix Options | 1 | |
| 14:03, 7 November 2012 | TransformationOptions96.jpg (file) |  |
77 KB | 1 | ||
| 13:51, 7 November 2012 | TransformOPtions1.jpg (file) |  |
38 KB | Transformation options from the Transform dialog box | 2 | |
| 16:47, 2 November 2012 | TransformDialogBox.jpg (file) |  |
195 KB | Transform dialog box | 1 | |
| 15:14, 22 October 2012 | NIHFall2012ResearchFestivalPosterJS.pdf (file) |  |
2.11 MB | 1 | ||
| 15:03, 22 October 2012 | GettingstartedJS.ppt (file) |  |
6.46 MB | Getting started with MIPAV presentation done by Justin | 1 | |
| 19:29, 26 September 2012 | BarrelDistDB.jpg (file) |  |
55 KB | Barrel Distortion Correction dialog box | 2 | |
| 18:23, 14 September 2012 | SwapSlices4DA.jpg (file) |  |
432 KB | Swap Slices 4D | 1 | |
| 18:00, 14 September 2012 | SwapSlices4D.jpg (file) |  |
1.12 MB | Swap Slices 4D - we have a 4D brain image with 16 volumes\69 slices and for our analysis we need slices from 32 to 46 only | 1 | |
| 19:36, 12 September 2012 | SwapVolumes16To0.jpg (file) |  |
1.11 MB | Swap Volumes - Volume #16 to position #0 | 1 | |
| 18:52, 12 September 2012 | SwapVolumes.jpg (file) |  |
347 KB | Utilities > 4D> Swap Volumes | 1 | |
| 15:24, 7 September 2012 | SwapSlices21To0.jpg (file) |  |
1.02 MB | Swap Slices (3D images) - an illustration oh how to copy and paste slice # 21 before slice #0 | 1 | |
| 13:27, 7 September 2012 | SwapSlices2.jpg (file) |  |
347 KB | 1 | ||
| 13:24, 7 September 2012 | SwapSLicesDialogBox.jpg (file) |  |
347 KB | 3 | ||
| 12:56, 28 August 2012 | AnalyzepMapFiletab.jpg (file) |  |
104 KB | NEI Retinal Registration: Analyze mpMap tab | 1 | |
| 12:50, 28 August 2012 | CreateMPmapTab.jpg (file) |  |
264 KB | NEI Retinal Registration: Create MP maps tab | 1 | |
| 12:47, 28 August 2012 | OutputDirectories.jpg (file) |  |
116 KB | NEI Retinal Registration: Figure - Output Directories: The plug in's input and output catalogs: given the Blue and Yellow as the input catalogs, the plug in created Output1, BlueReg1 and YellowReg1 catalogs after the first run and Output2, BlueReg2 and Ye | 1 | |
| 12:39, 28 August 2012 | Examples.jpg (file) |  |
632 KB | NEI Retinal Registration plug-in: Figure: (a) - the registered image, (b) - the MP map Yellow1 to Blue1 image, (c) - the MP map average image, (d) - the MP map standard deviation image, and (e) the Output directory | 1 | |
| 18:36, 27 August 2012 | NEIPlugInEQ4.jpg (file) |  |
27 KB | NEI retinal registration - equation4 | 1 | |
| 18:31, 27 August 2012 | NEIPlugInEQ3.jpg (file) |  |
15 KB | NEI Retinal registration equation 3 | 1 | |
| 18:13, 27 August 2012 | NEIPlugInEQ2.jpg (file) |  |
26 KB | NEI retinal registration plug-in, equation 2 | 1 | |
| 18:05, 27 August 2012 | NEIPlugInEQ1.jpg (file) |  |
80 KB | NEI Retinal Registration: In equation 1, absorbers other than the MP and fluorophores other than RPE lipofuscin are neglected to simplify the process. Typically, contributions from rhodopsin absorption will confound these measurements. In typical Fundus c | 1 | |
| 17:02, 27 August 2012 | RemovingBorder.jpg (file) |  |
96 KB | NEI Retinal registration plug -in: Removing the black border from the GM image: A1 and B1 are the far left and right non border pixels, O is the center pixel | 1 | |
| 19:39, 20 August 2012 | SarahShenPosterAugust2012.pdf (file) | |
911 KB | NIH’s Summer Research Program Poster Day 2012 August 9, 2012 | 1 | |
| 13:38, 20 August 2012 | CircleToRectangle1a.jpg (file) |  |
590 KB | Transformation: Conformal mapping: Circle to Rectangle - The user inputs 2 point VOIs. The first point is located at the center of the circle. The second point can be any point located on the actual circle | 1 | |
| 18:52, 17 August 2012 | CircularSectorToRectangleMapped.jpg (file) |  |
37 KB | Transform Conformal Mapping: The region inside a circular sector is mapped to a rectangle: z1 is the upper right point on rmax, z2 is the upper left point on rmax, z3 is the lower left point on rmin, and z4 is the lower right point on rmin | 1 | |
| 16:58, 17 August 2012 | Equation11.jpg (file) |  |
28 KB | 1 | ||
| 16:58, 17 August 2012 | Equation10.jpg (file) |  |
31 KB | 1 | ||
| 16:58, 17 August 2012 | Equation9.jpg (file) |  |
29 KB | 1 | ||
| 15:48, 17 August 2012 | CircularSectorToRectangleAngle.jpg (file) |  |
26 KB | Transform Conformal Mapping : Calculating the angle of the circular segment | 2 | |
| 15:45, 17 August 2012 | ConfMappingCircleCenter.jpg (file) |  |
27 KB | Transform Conformal mapping: Calculating the center of the circle to which the circular segment belongs | 1 | |
| 13:43, 13 August 2012 | N3Effects5.jpg (file) |  |
77 KB | Shadig Correction N3 inhomo . correction - Figure 4. The effects of different settings for the Inhomogeneity N3 algorithm on an image | 2 | |
| 15:04, 7 August 2012 | Fig14CumulativeHistogram.jpg (file) |  |
588 KB | A 2D RGB image and its cumulative histograms | 1 | |
| 15:01, 7 August 2012 | Fig13CumulativeHistogram.jpg (file) |  |
491 KB | A 2D RGB image and its cumulative histograms for each channel (red -c, green-d and blue-b). | 1 | |
| 14:55, 7 August 2012 | CumulHistogramBrain2CH.jpg (file) |  |
21 KB | A 3D grayscale image (a) and its cumulative histogram (b). | 2 | |
| 14:54, 7 August 2012 | CumulHistogramBrain2.jpg (file) |  |
40 KB | A 3D grayscale image (a) and its cumulative histogram (b). | 2 | |
| 14:49, 7 August 2012 | CumulativeHistogramSample.jpg (file) |  |
53 KB | A sample cumulative histogram | 2 | |
| 13:55, 7 August 2012 | HoughEllipseGeometry.jpg (file) |  |
25 KB | Hough Transform: Calculating a center of an ellipse: x1, x2, x3 - three ellipse points; (t, x1), (t, x2) and (t, x3) the tangents of the points x1, x2 and x3 correspondingly; m is the midpoint of (x1, x2), m1 is the midpoint of (x2, x3); o is the center o | 1 | |
| 13:11, 7 August 2012 | TwoLinesHoughTransform.jpg (file) |  |
17 KB | Hough Transform: The two bright spots are the Hough parameters of the two lines. From these spots' positions, r and theta parameters for two lines in the input image can be determined | 2 | |
| 13:06, 7 August 2012 | ParametricLineHough.jpg (file) |  |
24 KB | Parametric Hough transform: (a) a straight line in the original coordinates described in terms of the length of a normal from the origin to the line - r and orientation theta; (b) the Hough plane where points A, B, and C are transformed into three sinusoi | 2 | |
| 13:04, 7 August 2012 | LinearHough.jpg (file) |  |
17 KB | A set of image points (a), and how they can be fit into various line segments - (b) and (c) | 2 | |
| 19:29, 6 August 2012 | HoughParabolaDB.jpg (file) |  |
108 KB | Running the Hough Transform for Parabola Detection algorithm. Note that the detected parabola appears in red | 2 | |
| 19:24, 6 August 2012 | HoughEllipsesDialogBoxes1.jpg (file) |  |
182 KB | Running the Hough Transform for Ellipse Detection algorithm. Note that isolated ellipses checked for display appear in red | 2 | |
| 19:19, 6 August 2012 | HoughCirclesDialogBoxes.jpg (file) |  |
86 KB | Running the Hough Transform for Circle Detection algorithm. Note that only two of three isolated circles are shown in the result image, because only two were checked in the Hough Transform Circle Selection dialog box | 2 |
