Calculating the volume of masks and Detect folding: Difference between pages

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MIPAV>Angelfish100
 
MIPAV>Olgavovk
(moved Detect folding to BSpline registration: Detecting folding: Because this is a part of BSpline registration algorithm)
 
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You can calculate the volume of painted voxels, or mask, in an image and view the information about the volume on the Data page of the Output window.<br />
#REDIRECT [[BSpline registration: Detecting folding]]
 
'''To calculate the volume of masks'''<br />
1 Open an image, and paint the voxels in a desired area of the image.<br />
2 Follow the instructions for manually creating a mask in "Generating masks", "Segmenting Images Using Contours and Masks," <br />
3 ''Do not'' commit the paint, which permanently merges the paint layer with the image layer.<br />
4 Click the Calculate Volume of Paint icon, in the Paint toolbar. <br />
The region grow information (how many voxels or pixels are painted) and the volume of all painted voxels appear on the Data page of the Output window (Figure 9).<br />
 
'''To view the information'''<br />
1 Select the Output window.<br />
2 Select the Data tab on the Output window to view the information. The Data page of the Output window (Figure 9) appears.<br />
 
{| border="1" cellpadding="5"
|+ '''Figure 9. Data page in the Output window (left) listing the region grow and volume information from the painted voxels in the image (right)'''
|-
| rowspan="1" colspan="2" |
[[Image:exampleVolumeOutputWindow.jpg]]
|}
 
'''To save the information'''<br />
1 Select File &gt; Save Messages in the Output window. <br />
The Save dialog box opens.<br />
2 Specify a name for the messages file and select a location for storing it. <br />
3 Click Save. The software saves the file and places it in the specified location.<br />
 
 
 
[[Generating graphs]]

Revision as of 15:02, 11 April 2012