java.lang.Object
- java.awt.Component
- - java.awt.Container
  - - java.awt.Window
    - - java.awt.Dialog
      - javax.swing.JDialog
        
        gov.nih.mipav.view.dialogs.JDialogBase
        
        gov.nih.mipav.view.dialogs.JDialogLevelSet

All Implemented Interfaces:

AlgorithmInterface, DialogDefaultsInterface, java.awt.event.ActionListener, java.awt.event.FocusListener, java.awt.event.ItemListener, java.awt.event.WindowListener, java.awt.image.ImageObserver, java.awt.MenuContainer, java.io.Serializable, java.util.EventListener, javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants
```
public class JDialogLevelSet
extends JDialogBase
implements AlgorithmInterface
```
Dialog to get user input, then call the algorithm. The user is able to control the degree of blurring in all dimensions and indicate if a correction factor be applied to the z-dimension to account for differing resolutions between the xy resolutions (intra-plane) and the z resolution (inter-plane). The algorithms are executed in their own thread.

Version:

0.1 Nov 17, 1998

Author:

Matthew J. McAuliffe, Ph.D.

See Also:

AlgorithmGaussianBlur, Serialized Form

Nested Class Summary
- Nested classes/interfaces inherited from class gov.nih.mipav.view.dialogs.JDialogBase
  JDialogBase.CancelAction, JDialogBase.HelpAction, JDialogBase.OKAction
- Nested classes/interfaces inherited from class javax.swing.JDialog
  javax.swing.JDialog.AccessibleJDialog
- Nested classes/interfaces inherited from class java.awt.Dialog
  java.awt.Dialog.AccessibleAWTDialog, java.awt.Dialog.ModalExclusionType, java.awt.Dialog.ModalityType
- Nested classes/interfaces inherited from class java.awt.Window
  java.awt.Window.AccessibleAWTWindow, java.awt.Window.Type
- Nested classes/interfaces inherited from class java.awt.Container
  java.awt.Container.AccessibleAWTContainer
- Nested classes/interfaces inherited from class java.awt.Component
  java.awt.Component.AccessibleAWTComponent, java.awt.Component.BaselineResizeBehavior, java.awt.Component.BltBufferStrategy, java.awt.Component.FlipBufferStrategy

Field Summary

Fields
Modifier and Type	Field	Description
`private static int`	`CONTRACT`	DOCUMENT ME!
`private javax.swing.JRadioButton`	`contractButton`	DOCUMENT ME!
`private float`	`deltaT`	DOCUMENT ME!
`private float`	`edgeAttract`	DOCUMENT ME!
`private float`	`epsilon`	DOCUMENT ME!
`private static int`	`EXPAND`	DOCUMENT ME!
`private static int`	`EXPAND_CONTRACT`	DOCUMENT ME!
`private javax.swing.JRadioButton`	`expandButton`	DOCUMENT ME!
`private javax.swing.JRadioButton`	`expandContractButton`	DOCUMENT ME!
`private ModelImage`	`image`	DOCUMENT ME!
`private boolean`	`image25D`	Flag indicating if slices should be blurred independently.
`private javax.swing.JCheckBox`	`image25DCheckbox`	DOCUMENT ME!
`private int`	`iters`	DOCUMENT ME!
`private javax.swing.JCheckBox`	`itersCheckBox`	DOCUMENT ME!
`private javax.swing.JLabel`	`label3D`	difference between x,y resolutions (in plane) and z resolution (between planes).
`private javax.swing.JLabel`	`labelCorrected`	DOCUMENT ME!
`private javax.swing.JLabel`	`labelDeltaT`	DOCUMENT ME!
`private javax.swing.JLabel`	`labelEdgeAttract`	DOCUMENT ME!
`private javax.swing.JLabel`	`labelEpsilon`	DOCUMENT ME!
`private javax.swing.JLabel`	`labelGaussX`	DOCUMENT ME!
`private javax.swing.JLabel`	`labelGaussY`	DOCUMENT ME!
`private javax.swing.JLabel`	`labelGaussZ`	DOCUMENT ME!
`private javax.swing.JLabel`	`labelIters`	DOCUMENT ME!
`private javax.swing.JLabel`	`labelTestIters`	DOCUMENT ME!
`private AlgorithmLevelSet`	`levelSetAlgo`	DOCUMENT ME!
`private int`	`movement`	DOCUMENT ME!
`private javax.swing.ButtonGroup`	`movementGroup`	DOCUMENT ME!
`private float`	`normFactor`	DOCUMENT ME!
`private java.util.BitSet`	`paintMask`	DOCUMENT ME!
`private javax.swing.JCheckBox`	`resolutionCheckbox`	DOCUMENT ME!
`private float`	`scaleX`	DOCUMENT ME!
`private float`	`scaleY`	DOCUMENT ME!
`private float`	`scaleZ`	DOCUMENT ME!
`private static long`	`serialVersionUID`	Use serialVersionUID for interoperability.
`private int`	`testIters`	DOCUMENT ME!
`private javax.swing.JTextField`	`textDeltaT`	DOCUMENT ME!
`private javax.swing.JTextField`	`textEdgeAttract`	DOCUMENT ME!
`private javax.swing.JTextField`	`textEpsilon`	DOCUMENT ME!
`private javax.swing.JTextField`	`textGaussX`	DOCUMENT ME!
`private javax.swing.JTextField`	`textGaussY`	DOCUMENT ME!
`private javax.swing.JTextField`	`textGaussZ`	DOCUMENT ME!
`private javax.swing.JTextField`	`textIters`	DOCUMENT ME!
`private javax.swing.JTextField`	`textTestIters`	DOCUMENT ME!
`private java.lang.String[]`	`titles`	DOCUMENT ME!
`private ViewUserInterface`	`userInterface`	DOCUMENT ME!

Fields inherited from class gov.nih.mipav.view.dialogs.JDialogBase
applyButton, bar, cancelButton, cancelFlag, closeButton, HELP, helpButton, mainDialogPanel, NEW, OKButton, parentFrame, progressBar, REPLACE, runInSeparateThread, runningScriptFlag, runQuiet, serif12, serif12B, voiManager

Fields inherited from class javax.swing.JDialog
accessibleContext, rootPane, rootPaneCheckingEnabled

Fields inherited from class java.awt.Dialog
DEFAULT_MODALITY_TYPE

Fields inherited from class java.awt.Component
BOTTOM_ALIGNMENT, CENTER_ALIGNMENT, LEFT_ALIGNMENT, RIGHT_ALIGNMENT, TOP_ALIGNMENT

Fields inherited from interface java.awt.image.ImageObserver
ABORT, ALLBITS, ERROR, FRAMEBITS, HEIGHT, PROPERTIES, SOMEBITS, WIDTH

Fields inherited from interface javax.swing.WindowConstants
DISPOSE_ON_CLOSE, DO_NOTHING_ON_CLOSE, EXIT_ON_CLOSE, HIDE_ON_CLOSE

Constructor Summary

Constructors
Constructor Description

JDialogLevelSet(java.awt.Frame theParentFrame, ModelImage im)
Creates new dialog for finding the level set.

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`void`	`actionPerformed(java.awt.event.ActionEvent event)`	Closes dialog box when the OK button is pressed and calls the algorithm.
`void`	`algorithmPerformed(AlgorithmBase algorithm)`	This method is required if the AlgorithmPerformed interface is implemented.
`void`	`focusLost(java.awt.event.FocusEvent event)`	When the user clicks the mouse out of a text field, resets the neccessary variables.
`private void`	`init()`	Sets up the GUI (panels, buttons, etc) and displays it on the screen.
`void`	`itemStateChanged(java.awt.event.ItemEvent event)`	Changes scale based on resolution check box.

Methods inherited from class gov.nih.mipav.view.dialogs.JDialogBase
buildApplyButton, buildButtons, buildCancelButton, buildCancelButton, buildCloseButton, buildHelpButton, buildImageComboBox, buildOKButton, buildOKButton, buildOKCancelButtons, buildTitledBorder, buildTitledBorder, createLabel, createProgressBar, createProgressBar, createTextField, focusGained, getDialogName, isCancelled, isQuietRunning, isRunInSeparateThread, isScriptRunning, loadDefaults, loadDefaults, makeImageName, makeString, openNewFrame, saveDefaults, saveDefaults, setLeftHandSystem, setQuietRunning, setScriptRunning, setSeparateThread, setVisible, setVisible, setVisibleMenuBar, setVisibleStandard, setVOIManager, setWCSystem, testParameter, testParameterMin, updateFFTFileInfo, updateFileInfo, updateFileInfoOtherModality, updateFileInfoStatic, updateFileInfoStatic, updateFileTypeInfo, updateFileTypeInfo, windowActivated, windowClosed, windowClosing, windowDeactivated, windowDeiconified, windowIconified, windowOpened

Methods inherited from class javax.swing.JDialog
addImpl, createRootPane, dialogInit, getAccessibleContext, getContentPane, getDefaultCloseOperation, getGlassPane, getGraphics, getJMenuBar, getLayeredPane, getRootPane, getTransferHandler, isDefaultLookAndFeelDecorated, isRootPaneCheckingEnabled, paramString, processWindowEvent, remove, repaint, setContentPane, setDefaultCloseOperation, setDefaultLookAndFeelDecorated, setGlassPane, setJMenuBar, setLayeredPane, setLayout, setRootPane, setRootPaneCheckingEnabled, setTransferHandler, update

Methods inherited from class java.awt.Dialog
addNotify, getModalityType, getTitle, hide, isModal, isResizable, isUndecorated, setBackground, setModal, setModalityType, setOpacity, setResizable, setShape, setTitle, setUndecorated, show, toBack

Methods inherited from class java.awt.Window
addPropertyChangeListener, addPropertyChangeListener, addWindowFocusListener, addWindowListener, addWindowStateListener, applyResourceBundle, applyResourceBundle, createBufferStrategy, createBufferStrategy, dispose, getBackground, getBufferStrategy, getFocusableWindowState, getFocusCycleRootAncestor, getFocusOwner, getFocusTraversalKeys, getIconImages, getInputContext, getListeners, getLocale, getModalExclusionType, getMostRecentFocusOwner, getOpacity, getOwnedWindows, getOwner, getOwnerlessWindows, getShape, getToolkit, getType, getWarningString, getWindowFocusListeners, getWindowListeners, getWindows, getWindowStateListeners, isActive, isAlwaysOnTop, isAlwaysOnTopSupported, isAutoRequestFocus, isFocusableWindow, isFocusCycleRoot, isFocused, isLocationByPlatform, isOpaque, isShowing, isValidateRoot, pack, paint, postEvent, processEvent, processWindowFocusEvent, processWindowStateEvent, removeNotify, removeWindowFocusListener, removeWindowListener, removeWindowStateListener, reshape, setAlwaysOnTop, setAutoRequestFocus, setBounds, setBounds, setCursor, setFocusableWindowState, setFocusCycleRoot, setIconImage, setIconImages, setLocation, setLocation, setLocationByPlatform, setLocationRelativeTo, setMinimumSize, setModalExclusionType, setSize, setSize, setType, toFront

Methods inherited from class java.awt.Container
add, add, add, add, add, addContainerListener, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getAlignmentX, getAlignmentY, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalPolicy, getInsets, getLayout, getMaximumSize, getMinimumSize, getMousePosition, getPreferredSize, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusTraversalPolicyProvider, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paintComponents, preferredSize, print, printComponents, processContainerEvent, remove, removeAll, removeContainerListener, setComponentZOrder, setFocusTraversalKeys, setFocusTraversalPolicy, setFocusTraversalPolicyProvider, setFont, transferFocusDownCycle, validate, validateTree

Methods inherited from class java.awt.Component
action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, contains, createImage, createImage, createVolatileImage, createVolatileImage, disable, disableEvents, dispatchEvent, enable, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBaseline, getBaselineResizeBehavior, getBounds, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getFontMetrics, getForeground, getGraphicsConfiguration, getHeight, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocation, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMousePosition, getMouseWheelListeners, getName, getParent, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getSize, getTreeLock, getWidth, getX, getY, gotFocus, handleEvent, hasFocus, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isDoubleBuffered, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isMaximumSizeSet, isMinimumSizeSet, isPreferredSizeSet, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, prepareImage, prepareImage, printAll, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processKeyEvent, processMouseEvent, processMouseMotionEvent, processMouseWheelEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, requestFocus, requestFocus, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, requestFocusInWindow, resize, resize, revalidate, setComponentOrientation, setDropTarget, setEnabled, setFocusable, setFocusTraversalKeysEnabled, setForeground, setIgnoreRepaint, setLocale, setMaximumSize, setMixingCutoutShape, setName, setPreferredSize, show, size, toString, transferFocus, transferFocusBackward, transferFocusUpCycle

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

- Field Detail
  - serialVersionUID
```
private static final long serialVersionUID
```
    Use serialVersionUID for interoperability.
    
    See Also:
    
    Constant Field Values
  - EXPAND
```
private static final int EXPAND
```
    DOCUMENT ME!
    
    See Also:
    
    Constant Field Values
  - EXPAND_CONTRACT
```
private static final int EXPAND_CONTRACT
```
    DOCUMENT ME!
    
    See Also:
    
    Constant Field Values
  - CONTRACT
```
private static final int CONTRACT
```
    DOCUMENT ME!
    
    See Also:
    
    Constant Field Values
  - image25D
```
private boolean image25D
```
    Flag indicating if slices should be blurred independently.
  - image25DCheckbox
```
private javax.swing.JCheckBox image25DCheckbox
```
    DOCUMENT ME!
  - contractButton
```
private javax.swing.JRadioButton contractButton
```
    DOCUMENT ME!
  - deltaT
```
private float deltaT
```
    DOCUMENT ME!
  - edgeAttract
```
private float edgeAttract
```
    DOCUMENT ME!
  - epsilon
```
private float epsilon
```
    DOCUMENT ME!
  - expandButton
```
private javax.swing.JRadioButton expandButton
```
    DOCUMENT ME!
  - expandContractButton
```
private javax.swing.JRadioButton expandContractButton
```
    DOCUMENT ME!
  - image
```
private ModelImage image
```
    DOCUMENT ME!
  - iters
```
private int iters
```
    DOCUMENT ME!
  - itersCheckBox
```
private javax.swing.JCheckBox itersCheckBox
```
    DOCUMENT ME!
  - label3D
```
private javax.swing.JLabel label3D
```
    difference between x,y resolutions (in plane) and z resolution (between planes).
  - labelCorrected
```
private javax.swing.JLabel labelCorrected
```
    DOCUMENT ME!
  - labelDeltaT
```
private javax.swing.JLabel labelDeltaT
```
    DOCUMENT ME!
  - labelEdgeAttract
```
private javax.swing.JLabel labelEdgeAttract
```
    DOCUMENT ME!
  - labelEpsilon
```
private javax.swing.JLabel labelEpsilon
```
    DOCUMENT ME!
  - labelGaussX
```
private javax.swing.JLabel labelGaussX
```
    DOCUMENT ME!
  - labelGaussY
```
private javax.swing.JLabel labelGaussY
```
    DOCUMENT ME!
  - labelGaussZ
```
private javax.swing.JLabel labelGaussZ
```
    DOCUMENT ME!
  - labelIters
```
private javax.swing.JLabel labelIters
```
    DOCUMENT ME!
  - labelTestIters
```
private javax.swing.JLabel labelTestIters
```
    DOCUMENT ME!
  - levelSetAlgo
```
private AlgorithmLevelSet levelSetAlgo
```
    DOCUMENT ME!
  - movement
```
private int movement
```
    DOCUMENT ME!
  - movementGroup
```
private javax.swing.ButtonGroup movementGroup
```
    DOCUMENT ME!
  - normFactor
```
private float normFactor
```
    DOCUMENT ME!
  - paintMask
```
private java.util.BitSet paintMask
```
    DOCUMENT ME!
  - resolutionCheckbox
```
private javax.swing.JCheckBox resolutionCheckbox
```
    DOCUMENT ME!
  - scaleX
```
private float scaleX
```
    DOCUMENT ME!
  - scaleY
```
private float scaleY
```
    DOCUMENT ME!
  - scaleZ
```
private float scaleZ
```
    DOCUMENT ME!
  - testIters
```
private int testIters
```
    DOCUMENT ME!
  - textDeltaT
```
private javax.swing.JTextField textDeltaT
```
    DOCUMENT ME!
  - textEdgeAttract
```
private javax.swing.JTextField textEdgeAttract
```
    DOCUMENT ME!
  - textEpsilon
```
private javax.swing.JTextField textEpsilon
```
    DOCUMENT ME!
  - textGaussX
```
private javax.swing.JTextField textGaussX
```
    DOCUMENT ME!
  - textGaussY
```
private javax.swing.JTextField textGaussY
```
    DOCUMENT ME!
  - textGaussZ
```
private javax.swing.JTextField textGaussZ
```
    DOCUMENT ME!
  - textIters
```
private javax.swing.JTextField textIters
```
    DOCUMENT ME!
  - textTestIters
```
private javax.swing.JTextField textTestIters
```
    DOCUMENT ME!
  - titles
```
private java.lang.String[] titles
```
    DOCUMENT ME!
  - userInterface
```
private ViewUserInterface userInterface
```
    DOCUMENT ME!
- Constructor Detail
  - JDialogLevelSet
```
public JDialogLevelSet(java.awt.Frame theParentFrame,
                       ModelImage im)
```
    Creates new dialog for finding the level set.
    
    Parameters:
    
    theParentFrame - Parent frame
    
    im - Source image
- Method Detail
  - actionPerformed
```
public void actionPerformed(java.awt.event.ActionEvent event)
```
    Closes dialog box when the OK button is pressed and calls the algorithm.
    
    Specified by:
    
    actionPerformed in interface java.awt.event.ActionListener
    
    Overrides:
    
    actionPerformed in class JDialogBase
    
    Parameters:
    
    event - event that triggers function
  - algorithmPerformed
```
public void algorithmPerformed(AlgorithmBase algorithm)
```
    This method is required if the AlgorithmPerformed interface is implemented. It is called by the algorithms when it has completed or failed to to complete, so that the dialog can be display the result image and/or clean up.
    
    Specified by:
    
    algorithmPerformed in interface AlgorithmInterface
    
    Parameters:
    
    algorithm - Algorithm that caused the event.
  - focusLost
```
public void focusLost(java.awt.event.FocusEvent event)
```
    When the user clicks the mouse out of a text field, resets the neccessary variables.
    
    Specified by:
    
    focusLost in interface java.awt.event.FocusListener
    
    Overrides:
    
    focusLost in class JDialogBase
    
    Parameters:
    
    event - event that triggers this function
  - itemStateChanged
```
public void itemStateChanged(java.awt.event.ItemEvent event)
```
    Changes scale based on resolution check box.
    
    Specified by:
    
    itemStateChanged in interface java.awt.event.ItemListener
    
    Overrides:
    
    itemStateChanged in class JDialogBase
    
    Parameters:
    
    event - Event that cause the method to fire
  - init
```
private void init()
```
    Sets up the GUI (panels, buttons, etc) and displays it on the screen.

Class JDialogLevelSet

Nested Class Summary

Nested classes/interfaces inherited from class gov.nih.mipav.view.dialogs.JDialogBase

Nested classes/interfaces inherited from class javax.swing.JDialog

Nested classes/interfaces inherited from class java.awt.Dialog

Nested classes/interfaces inherited from class java.awt.Window

Nested classes/interfaces inherited from class java.awt.Container

Nested classes/interfaces inherited from class java.awt.Component

Field Summary

Fields inherited from class gov.nih.mipav.view.dialogs.JDialogBase

Fields inherited from class javax.swing.JDialog

Fields inherited from class java.awt.Dialog

Fields inherited from class java.awt.Component

Fields inherited from interface java.awt.image.ImageObserver

Fields inherited from interface javax.swing.WindowConstants

Constructor Summary

Method Summary

Methods inherited from class gov.nih.mipav.view.dialogs.JDialogBase

Methods inherited from class javax.swing.JDialog

Methods inherited from class java.awt.Dialog

Methods inherited from class java.awt.Window

Methods inherited from class java.awt.Container

Methods inherited from class java.awt.Component

Methods inherited from class java.lang.Object

Field Detail

serialVersionUID

EXPAND

EXPAND_CONTRACT

CONTRACT

image25D

image25DCheckbox

contractButton

deltaT

edgeAttract

epsilon

expandButton

expandContractButton

image

iters

itersCheckBox

label3D

labelCorrected

labelDeltaT

labelEdgeAttract

labelEpsilon

labelGaussX

labelGaussY

labelGaussZ

labelIters

labelTestIters

levelSetAlgo

movement

movementGroup

normFactor

paintMask

resolutionCheckbox

scaleX

scaleY

scaleZ

testIters

textDeltaT

textEdgeAttract

textEpsilon

textGaussX

textGaussY

textGaussZ

textIters

textTestIters

titles

userInterface

Constructor Detail

JDialogLevelSet

Method Detail

actionPerformed

algorithmPerformed

focusLost

itemStateChanged

init