Package gov.nih.mipav.view.dialogs
Class JDialogActiveContoursWithoutEdges
java.lang.Object
java.awt.Component
java.awt.Container
java.awt.Window
java.awt.Dialog
javax.swing.JDialog
gov.nih.mipav.view.dialogs.JDialogBase
gov.nih.mipav.view.dialogs.JDialogScriptableBase
gov.nih.mipav.view.dialogs.JDialogActiveContoursWithoutEdges
- All Implemented Interfaces:
AlgorithmInterface,ScriptableActionInterface,DialogDefaultsInterface,ActionListener,FocusListener,ItemListener,WindowListener,ImageObserver,MenuContainer,Serializable,EventListener,Accessible,RootPaneContainer,WindowConstants
public class JDialogActiveContoursWithoutEdges
extends JDialogScriptableBase
implements AlgorithmInterface, ItemListener, ScriptableActionInterface
Dialog to get user input, then call the algorithm. The user has the option to generate a new image or replace the
source image. It should be noted that the algorithms are executed in their own threads.
- See Also:
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Nested Class Summary
Nested classes/interfaces inherited from class gov.nih.mipav.view.dialogs.JDialogBase
JDialogBase.CancelAction, JDialogBase.HelpAction, JDialogBase.OKActionNested classes/interfaces inherited from class javax.swing.JDialog
JDialog.AccessibleJDialogNested classes/interfaces inherited from class java.awt.Dialog
Dialog.AccessibleAWTDialog, Dialog.ModalExclusionType, Dialog.ModalityTypeNested classes/interfaces inherited from class java.awt.Window
Window.AccessibleAWTWindow, Window.TypeNested classes/interfaces inherited from class java.awt.Container
Container.AccessibleAWTContainerNested classes/interfaces inherited from class java.awt.Component
Component.AccessibleAWTComponent, Component.BaselineResizeBehavior, Component.BltBufferStrategy, Component.FlipBufferStrategy -
Field Summary
FieldsModifier and TypeFieldDescriptionDOCUMENT ME!static final intDOCUMENT ME!private static final intUse serialVersionUID for interoperability.private JRadioButtonDOCUMENT ME!static final intDOCUMENT ME!private static final intprivate static final intprivate JRadioButtonprivate JRadioButtonprivate ModelImageDOCUMENT ME!private intprivate static final intprivate JRadioButtonDOCUMENT ME!private JPanelDOCUMENT ME!private ButtonGroupDOCUMENT ME!private JPanelDOCUMENT ME!private intDOCUMENT ME!private static final intprivate JRadioButtonDOCUMENT ME!private intprivate ButtonGroupDOCUMENT ME!private JPanelDOCUMENT ME!private doubleprivate JPanelDOCUMENT ME!private ModelImageDOCUMENT ME!private static final intprivate JRadioButtonDOCUMENT ME!private JTextFieldprivate JTextFieldprivate String[]DOCUMENT ME!private static final intprivate JRadioButtonDOCUMENT ME!private static final intprivate JRadioButtonDOCUMENT ME!private static final intprivate JRadioButtonDOCUMENT ME!static final intDOCUMENT ME!Fields inherited from class gov.nih.mipav.view.dialogs.JDialogScriptableBase
displayInNewFrame, isComplete, scriptParametersFields inherited from class gov.nih.mipav.view.dialogs.JDialogBase
applyButton, bar, cancelButton, cancelFlag, closeButton, HELP, helpButton, mainDialogPanel, NEW, OKButton, parentFrame, progressBar, REPLACE, runInSeparateThread, runningScriptFlag, runQuiet, serif12, serif12B, voiManagerFields inherited from class javax.swing.JDialog
accessibleContext, rootPane, rootPaneCheckingEnabledFields inherited from class java.awt.Dialog
DEFAULT_MODALITY_TYPEFields inherited from class java.awt.Component
BOTTOM_ALIGNMENT, CENTER_ALIGNMENT, LEFT_ALIGNMENT, RIGHT_ALIGNMENT, TOP_ALIGNMENTFields inherited from interface java.awt.image.ImageObserver
ABORT, ALLBITS, ERROR, FRAMEBITS, HEIGHT, PROPERTIES, SOMEBITS, WIDTHFields inherited from interface javax.swing.WindowConstants
DISPOSE_ON_CLOSE, DO_NOTHING_ON_CLOSE, EXIT_ON_CLOSE, HIDE_ON_CLOSE -
Constructor Summary
ConstructorsConstructorDescriptionEmpty constructor needed for dynamic instantiation (used during scripting).Used primarily for the script to store variables and run the algorithm.JDialogActiveContoursWithoutEdges(Frame theParentFrame, ModelImage im) Creates a new JDialogActiveContoursWithoutEdges object. -
Method Summary
Modifier and TypeMethodDescriptionvoidactionPerformed(ActionEvent event) Closes dialog box when the OK button is pressed and calls the algorithm.voidalgorithmPerformed(AlgorithmBase algorithm) This method is required if the AlgorithmPerformed interface is implemented.protected voidOnce all the necessary variables are set, call the Frequency Filter algorithm based on what type of image this is and whether or not there is a separate destination image.Returns a table listing the input parameters of this algorithm (which should match up with the scripting parameters used insetGUIFromParams()).Returns a table listing the output parameters of this algorithm (usually just labels used to obtain output image names later).protected voidStore the result image in the script runner's image table now that the action execution is finished.Return meta-information about this discoverable action for categorization and labeling purposes.Accessor that returns the image.private voidinit()Sets up the GUI (panels, buttons, etc) and displays it on the screen.booleanReturns whether the action has successfully completed its execution.protected voidSet the dialog GUI using the script parameters while running this algorithm as part of a script.voidsetIterations(int iterations) Accessor that sets the iterations variable.voidsetMaskType(int maskType) Accessor that sets the mask typevoidsetMethod(int method) Accessor that sets the method (chan, vector, twophase).voidsetMu(double mu) Accessor that sets the length parameter mu.private booleanUse the GUI results to set up the variables needed to run the algorithm.protected voidRecord the parameters just used to run this algorithm in a script.Methods inherited from class gov.nih.mipav.view.dialogs.JDialogScriptableBase
getDialogActionString, insertScriptLine, isComplete, scriptRun, setCompleteMethods inherited from class gov.nih.mipav.view.dialogs.JDialogBase
buildApplyButton, buildButtons, buildCancelButton, buildCancelButton, buildCloseButton, buildHelpButton, buildImageComboBox, buildOKButton, buildOKButton, buildOKCancelButtons, buildTitledBorder, buildTitledBorder, createLabel, createProgressBar, createProgressBar, createTextField, focusGained, focusLost, getDialogName, isCancelled, isQuietRunning, isRunInSeparateThread, isScriptRunning, itemStateChanged, loadDefaults, loadDefaults, makeImageName, makeString, openNewFrame, saveDefaults, saveDefaults, setLeftHandSystem, setQuietRunning, setScriptRunning, setSeparateThread, setVisible, setVisible, setVisibleMenuBar, setVisibleStandard, setVOIManager, setWCSystem, testParameter, testParameterMin, updateFFTFileInfo, updateFileInfo, updateFileInfoOtherModality, updateFileInfoStatic, updateFileInfoStatic, updateFileTypeInfo, updateFileTypeInfo, windowActivated, windowClosed, windowClosing, windowDeactivated, windowDeiconified, windowIconified, windowOpenedMethods inherited from class javax.swing.JDialog
addImpl, createRootPane, dialogInit, getAccessibleContext, getContentPane, getDefaultCloseOperation, getGlassPane, getGraphics, getJMenuBar, getLayeredPane, getRootPane, getTransferHandler, isDefaultLookAndFeelDecorated, isRootPaneCheckingEnabled, paramString, processWindowEvent, remove, repaint, setContentPane, setDefaultCloseOperation, setDefaultLookAndFeelDecorated, setGlassPane, setJMenuBar, setLayeredPane, setLayout, setRootPane, setRootPaneCheckingEnabled, setTransferHandler, updateMethods inherited from class java.awt.Dialog
addNotify, getModalityType, getTitle, hide, isModal, isResizable, isUndecorated, setBackground, setModal, setModalityType, setOpacity, setResizable, setShape, setTitle, setUndecorated, show, toBackMethods inherited from class java.awt.Window
addPropertyChangeListener, addPropertyChangeListener, addWindowFocusListener, addWindowListener, addWindowStateListener, applyResourceBundle, applyResourceBundle, createBufferStrategy, createBufferStrategy, dispose, getBackground, getBufferStrategy, getFocusableWindowState, getFocusCycleRootAncestor, getFocusOwner, getFocusTraversalKeys, getIconImages, getInputContext, getListeners, getLocale, getModalExclusionType, getMostRecentFocusOwner, getOpacity, getOwnedWindows, getOwner, getOwnerlessWindows, getShape, getToolkit, getType, getWarningString, getWindowFocusListeners, getWindowListeners, getWindows, getWindowStateListeners, isActive, isAlwaysOnTop, isAlwaysOnTopSupported, isAutoRequestFocus, isFocusableWindow, isFocusCycleRoot, isFocused, isLocationByPlatform, isOpaque, isShowing, isValidateRoot, pack, paint, postEvent, processEvent, processWindowFocusEvent, processWindowStateEvent, removeNotify, removeWindowFocusListener, removeWindowListener, removeWindowStateListener, reshape, setAlwaysOnTop, setAutoRequestFocus, setBounds, setBounds, setCursor, setFocusableWindowState, setFocusCycleRoot, setIconImage, setIconImages, setLocation, setLocation, setLocationByPlatform, setLocationRelativeTo, setMinimumSize, setModalExclusionType, setSize, setSize, setType, toFrontMethods inherited from class java.awt.Container
add, add, add, add, add, addContainerListener, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getAlignmentX, getAlignmentY, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalPolicy, getInsets, getLayout, getMaximumSize, getMinimumSize, getMousePosition, getPreferredSize, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusTraversalPolicyProvider, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paintComponents, preferredSize, print, printComponents, processContainerEvent, remove, removeAll, removeContainerListener, setComponentZOrder, setFocusTraversalKeys, setFocusTraversalPolicy, setFocusTraversalPolicyProvider, setFont, transferFocusDownCycle, validate, validateTreeMethods inherited from class java.awt.Component
action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, contains, createImage, createImage, createVolatileImage, createVolatileImage, disable, disableEvents, dispatchEvent, enable, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBaseline, getBaselineResizeBehavior, getBounds, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getFontMetrics, getForeground, getGraphicsConfiguration, getHeight, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocation, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMousePosition, getMouseWheelListeners, getName, getParent, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getSize, getTreeLock, getWidth, getX, getY, gotFocus, handleEvent, hasFocus, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isDoubleBuffered, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isMaximumSizeSet, isMinimumSizeSet, isPreferredSizeSet, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, prepareImage, prepareImage, printAll, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processKeyEvent, processMouseEvent, processMouseMotionEvent, processMouseWheelEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, requestFocus, requestFocus, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, requestFocusInWindow, resize, resize, revalidate, setComponentOrientation, setDropTarget, setEnabled, setFocusable, setFocusTraversalKeysEnabled, setForeground, setIgnoreRepaint, setLocale, setMaximumSize, setMixingCutoutShape, setName, setPreferredSize, show, size, toString, transferFocus, transferFocusBackward, transferFocusUpCycleMethods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, waitMethods inherited from interface java.awt.event.ItemListener
itemStateChangedMethods inherited from interface gov.nih.mipav.model.scripting.ScriptableActionInterface
insertScriptLine, scriptRun
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Field Details
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chan
private static final int chanUse serialVersionUID for interoperability.- See Also:
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vector
private static final int vector- See Also:
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twophase
private static final int twophase- See Also:
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method
private int method -
user
private static final int user- See Also:
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small
private static final int small- See Also:
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medium
private static final int medium- See Also:
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large
private static final int large- See Also:
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holes
private static final int holes- See Also:
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holes_small
private static final int holes_small- See Also:
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WINDOW
public static final int WINDOWDOCUMENT ME!- See Also:
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GAUSSIAN
public static final int GAUSSIANDOCUMENT ME!- See Also:
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BUTTERWORTH
public static final int BUTTERWORTHDOCUMENT ME!- See Also:
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mediumCircularButton
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largeCircularButton
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holesButton
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holesAndSmallCircularButton
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twoPhaseButton
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methodGroup
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methodPanel
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parameterPanel
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maskPanel
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maskType
private int maskTypeDOCUMENT ME! -
maskGroup
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activeContoursAlgo
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vectorButton
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smallCircularButton
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image
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userVOIButton
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mainPanel
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resultImage
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titles
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channelButton
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textIterations
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iterations
private int iterations -
textMu
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mu
private double mu
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Constructor Details
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JDialogActiveContoursWithoutEdges
public JDialogActiveContoursWithoutEdges()Empty constructor needed for dynamic instantiation (used during scripting). -
JDialogActiveContoursWithoutEdges
Used primarily for the script to store variables and run the algorithm. No actual dialog will appear but the set up info and result image will be stored here.- Parameters:
im- Source image.
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JDialogActiveContoursWithoutEdges
Creates a new JDialogActiveContoursWithoutEdges object.- Parameters:
theParentFrame- Parent frame.im- Source image.
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Method Details
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actionPerformed
Closes dialog box when the OK button is pressed and calls the algorithm.- Specified by:
actionPerformedin interfaceActionListener- Overrides:
actionPerformedin classJDialogBase- Parameters:
event- Event that triggers function.
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algorithmPerformed
This method is required if the AlgorithmPerformed interface is implemented. It is called by the algorithms when it has completed or failed to to complete, so that the dialog can be display the result image and/or clean up.- Specified by:
algorithmPerformedin interfaceAlgorithmInterface- Parameters:
algorithm- Algorithm that caused the event.
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getResultImage
Accessor that returns the image.- Returns:
- The result image.
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setMaskType
public void setMaskType(int maskType) Accessor that sets the mask type- Parameters:
maskType- Value to set the mask type to
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setIterations
public void setIterations(int iterations) Accessor that sets the iterations variable.- Parameters:
iterations- Value to set iterations to.
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setMu
public void setMu(double mu) Accessor that sets the length parameter mu.- Parameters:
mu- Value to set mu to.
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setMethod
public void setMethod(int method) Accessor that sets the method (chan, vector, twophase).- Parameters:
method- Value to set the method to.
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callAlgorithm
protected void callAlgorithm()Once all the necessary variables are set, call the Frequency Filter algorithm based on what type of image this is and whether or not there is a separate destination image.- Specified by:
callAlgorithmin classJDialogScriptableBase
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doPostAlgorithmActions
protected void doPostAlgorithmActions()Store the result image in the script runner's image table now that the action execution is finished.- Overrides:
doPostAlgorithmActionsin classJDialogScriptableBase
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setGUIFromParams
protected void setGUIFromParams()Set the dialog GUI using the script parameters while running this algorithm as part of a script.- Specified by:
setGUIFromParamsin classJDialogScriptableBase
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storeParamsFromGUI
Record the parameters just used to run this algorithm in a script.- Specified by:
storeParamsFromGUIin classJDialogScriptableBase- Throws:
ParserException- If there is a problem creating/recording the new parameters.
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init
private void init()Sets up the GUI (panels, buttons, etc) and displays it on the screen. -
setVariables
private boolean setVariables()Use the GUI results to set up the variables needed to run the algorithm.- Returns:
trueif parameters set successfully,falseotherwise.
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getActionMetadata
Return meta-information about this discoverable action for categorization and labeling purposes.- Returns:
- Metadata for this action.
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createInputParameters
Returns a table listing the input parameters of this algorithm (which should match up with the scripting parameters used insetGUIFromParams()).- Returns:
- A parameter table listing the inputs of this algorithm.
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createOutputParameters
Returns a table listing the output parameters of this algorithm (usually just labels used to obtain output image names later).- Returns:
- A parameter table listing the outputs of this algorithm.
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isActionComplete
public boolean isActionComplete()Returns whether the action has successfully completed its execution.- Returns:
- True, if the action is complete. False, if the action failed or is still running.
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