java.lang.Object
- gov.nih.mipav.model.structures.ModelSerialCloneable
- - gov.nih.mipav.model.file.FileInfoBase
  - - gov.nih.mipav.model.file.FileInfoICS

All Implemented Interfaces:

java.io.Serializable, java.lang.Cloneable
```
public class FileInfoICS
extends FileInfoBase
```
This structures contains the information that describes how an ICS image is stored on disk.

See Also:

FileICS, Serialized Form

Nested Class Summary
- Nested classes/interfaces inherited from class gov.nih.mipav.model.file.FileInfoBase
  FileInfoBase.AxisOrientation, FileInfoBase.ImageOrientation, FileInfoBase.Modality, FileInfoBase.Unit, FileInfoBase.UnitType

Field Summary

Fields
Modifier and Type	Field	Description
`private java.lang.String`	`captureVersion`	DOCUMENT ME!
`private java.lang.String[]`	`channels`	DOCUMENT ME!
`private java.lang.String`	`dataSetFileName`	DOCUMENT ME!
`private java.lang.String[]`	`exPhotonCnt`	DOCUMENT ME!
`private java.lang.String`	`filterExposureTimeX`	DOCUMENT ME!
`private java.lang.String[]`	`filterFluorophoreX`	DOCUMENT ME!
`private java.lang.String[]`	`history`	DOCUMENT ME!
`private java.lang.String[]`	`labels`	DOCUMENT ME!
`private java.lang.String[]`	`lambdaEm`	DOCUMENT ME!
`private java.lang.String[]`	`lambdaEx`	DOCUMENT ME!
`private java.lang.String[]`	`mapchannel`	DOCUMENT ME!
`private java.lang.String[]`	`numAperture`	DOCUMENT ME!
`private java.lang.String[]`	`pinholeRadius`	DOCUMENT ME!
`private java.lang.String`	`plateChamberID`	DOCUMENT ME!
`private java.lang.String`	`plateVesselID`	DOCUMENT ME!
`private java.lang.String[]`	`probe`	DOCUMENT ME!
`private java.lang.String[]`	`refrInxLensMedium`	DOCUMENT ME!
`private java.lang.String[]`	`refrInxMedium`	DOCUMENT ME!
`private java.lang.String`	`scilType`	DOCUMENT ME!
`private java.lang.String`	`sensorModel`	DOCUMENT ME!
`private java.lang.String`	`sensorType`	DOCUMENT ME!
`private static long`	`serialVersionUID`	Use serialVersionUID for interoperability.
`private java.lang.String[]`	`specimen`	DOCUMENT ME!
`private java.lang.String[]`	`specimenSpecies`	DOCUMENT ME!
`private java.lang.String`	`version`	DOCUMENT ME!

Fields inherited from class gov.nih.mipav.model.file.FileInfoBase
ANGSTROMS, ANGSTROMS_STRING, AXIAL, axisOrientation, axisOrientationStr, BIOMAGNETIC_IMAGING, cameraMake, cameraModel, CENTIMETERS, CENTIMETERS_STRING, COLOR_FLOW_DOPPLER, COMPRESSION_BZIP2, COMPRESSION_GZIP, COMPRESSION_NONE, COMPRESSION_ZIP, COMPUTED_RADIOGRAPHY, COMPUTED_TOMOGRAPHY, conversionSpaceTimeUnits, CORONAL, DEGREES, DEGREES_STRING, DIAPHANOGRAPHY, DIGITAL_RADIOGRAPHY, DUPLEX_DOPPLER, ENDOSCOPY, exposureTime, EXTERNAL_CAMERA_PHOTOGRAPHY, FA, fileName, fileSuffix, FNumber, focalLength, focalLength35, GENERAL_MICROSCOPY, HARDCOPY, HOURS, HOURS_STRING, HZ, HZ_STRING, ICG, imageOrientation, INCHES, INCHES_STRING, INTRAORAL_RADIOGRAPHY, ISOSpeedRating, KILOMETERS, KILOMETERS_STRING, LASER_SURFACE_SCAN, MAGNETIC_RESONANCE, MAGNETIC_RESONANCE_ANGIOGRAPHY, MAGNETIC_RESONANCE_SPECTROSCOPY, MAMMOGRAPHY, METERS, METERS_STRING, MICROMETERS, MICROMETERS_STRING, MICROSEC, MICROSEC_STRING, MILES, MILES_STRING, MILLIMETERS, MILLIMETERS_STRING, MILLISEC, MILLISEC_STRING, MILS, MILS_STRING, MINUTES, MINUTES_STRING, modality, NANOMETERS, NANOMETERS_STRING, NANOSEC, NANOSEC_STRING, NUCLEAR_MEDICINE, ORI_A2P_TYPE, ORI_I2S_TYPE, ORI_L2R_TYPE, ORI_P2A_TYPE, ORI_R2L_TYPE, ORI_S2I_TYPE, ORI_UNKNOWN_TYPE, origin, OTHER, PANORAMIC_XRAY, POSITRON_EMISSION_TOMOGRAPHY, PPM, PPM_STRING, RADIO_FLUOROSCOPY, RADIOGRAPHIC_IMAGING, RADIOTHERAPY_DOSE, RADIOTHERAPY_IMAGE, RADIOTHERAPY_PLAN, RADIOTHERAPY_RECORD, RADIOTHERAPY_STRUCTURE_SET, RADS, RADS_STRING, RED_FREE, SAGITTAL, SECONDS, SECONDS_STRING, SINGLE_PHOTON_EMISSION_COMPUTED_TOMOGRAPHY, SLIDE_MICROSCOPY, sUnits, tagDescription, tagName, THERMOGRAPHY, TRANSFORM_ANOTHER_DATASET, TRANSFORM_MNI_152, TRANSFORM_SCANNER_ANATOMICAL, TRANSFORM_TALAIRACH_TOURNOUX, TRANSFORM_UNKNOWN, tUnits, ULTRASOUND, unitsOfMeasure, UNKNOWN_MEASURE, UNKNOWN_MODALITY, UNKNOWN_ORIENT, UNKNOWN_STRING, XRAY_ANGIOGRAPHY

Constructor Summary

Constructors
Constructor Description

FileInfoICS(java.lang.String name, java.lang.String directory, int format)
File info storage constructor.

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`void`	`displayAboutInfo(JDialogBase dlog, TransMatrix matrix)`	Displays the file information.
`void`	`setCaptureVersion(java.lang.String captureVersion)`	DOCUMENT ME!
`void`	`setChannels(java.lang.String[] channels)`	DOCUMENT ME!
`void`	`setDataSetFileName(java.lang.String dataSetFileName)`	DOCUMENT ME!
`void`	`setExPhotonCnt(java.lang.String[] exPhotonCnt)`	DOCUMENT ME!
`void`	`setFilterExposureTimeX(java.lang.String filterExposureTimeX)`	DOCUMENT ME!
`void`	`setFilterFluorophoreX(java.lang.String[] filterFluorophoreX)`	DOCUMENT ME!
`void`	`setHistory(java.lang.String[] history)`	DOCUMENT ME!
`void`	`setLabels(java.lang.String[] labels)`	DOCUMENT ME!
`void`	`setLambdaEm(java.lang.String[] lambdaEm)`	DOCUMENT ME!
`void`	`setLambdaEx(java.lang.String[] lambdaEx)`	DOCUMENT ME!
`void`	`setMapchannel(java.lang.String[] mapchannel)`	DOCUMENT ME!
`void`	`setNumAperture(java.lang.String[] numAperture)`	DOCUMENT ME!
`void`	`setPinholeRadius(java.lang.String[] pinholeRadius)`	DOCUMENT ME!
`void`	`setPlateChamberID(java.lang.String plateChamberID)`	DOCUMENT ME!
`void`	`setPlateVesselID(java.lang.String plateVesselID)`	DOCUMENT ME!
`void`	`setProbe(java.lang.String[] probe)`	DOCUMENT ME!
`void`	`setRefrInxLensMedium(java.lang.String[] refrInxLensMedium)`	DOCUMENT ME!
`void`	`setRefrInxMedium(java.lang.String[] refrInxMedium)`	DOCUMENT ME!
`void`	`setScilType(java.lang.String scilType)`	DOCUMENT ME!
`void`	`setSensorModel(java.lang.String sensorModel)`	DOCUMENT ME!
`void`	`setSensorType(java.lang.String sensorType)`	DOCUMENT ME!
`void`	`setSpecimen(java.lang.String[] specimen)`	DOCUMENT ME!
`void`	`setSpecimenSpecies(java.lang.String[] specimenSpecies)`	DOCUMENT ME!
`void`	`setVersion(java.lang.String version)`	DOCUMENT ME!

Methods inherited from class gov.nih.mipav.model.file.FileInfoBase
copyCoreInfo, copyCoreInfo, displayAboutInfo, displayPrimaryInfo, finalize, getAboutInfo, getAllSameDimUnits, getAreaUnitsOfMeasureStr, getAxisDirection, getAxisOrientation, getAxisOrientation, getAxisOrientationFromStr, getAxisOrientationStr, getCameraMake, getCameraModel, getCompressionType, getDataType, getDataTypeFromStr, getEndianess, getEndianessFromStr, getExposureTime, getExtents, getFileDirectory, getFileFormat, getFileName, getFileSuffix, getFNumber, getFocalLength, getFocalLength35, getImageOrientation, getImageOrientationFromStr, getImageOrientationStr, getIs2_5D, getISOSpeedRating, getLPSOrigin, getLUT, getMax, getMaxB, getMaxG, getMaxR, getMin, getMinB, getMinG, getMinR, getModality, getModalityFromStr, getModalityStr, getModalityStr, getMultiFile, getNumOfBytesPerPixel, getOffset, getOrigin, getOrigin, getOriginalEndianess, getOriginAtSlice, getPhotometric, getPixelPadValue, getPrimaryInfo, getRescaleIntercept, getRescaleSlope, getResolution, getResolutions, getSize, getSliceThickness, getUnitsOfMeasure, getUnitsOfMeasure, getUnitsOfMeasureAbbrevStr, getUnitsOfMeasureAbbrevStr, getUnitsOfMeasureFromStr, getUnitsOfMeasureStr, getUnitsOfMeasureStr, getVolumeUnitsOfMeasureStr, isDicomOrdered, oppositeOrient, sameAxis, setAxisOrientation, setAxisOrientation, setCameraMake, setCameraModel, setCompressionType, setDataType, setEndianess, setExposureTime, setExtents, setExtents, setFileDirectory, setFileFormat, setFileName, setFileSuffix, setFNumber, setFocalLength, setFocalLength35, setImageOrientation, setISOSpeedRating, setLUT, setMax, setMaxB, setMaxG, setMaxR, setMin, setMinB, setMinG, setMinR, setModality, setMultiFile, setOffset, setOrigin, setOrigin, setOriginalEndianess, setPhotometric, setPixelPadValue, setRescaleIntercept, setRescaleSlope, setResolutions, setResolutions, setSliceThickness, setTagDescription, setTagName, setUnitsOfMeasure, setUnitsOfMeasure, setUnitsOfMeasure, setUnitsOfMeasure, toString

Methods inherited from class gov.nih.mipav.model.structures.ModelSerialCloneable
clone, nativeClone

Methods inherited from class java.lang.Object
equals, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

serialVersionUID
```
private static final long serialVersionUID
```
Use serialVersionUID for interoperability.

See Also:

Constant Field Values

captureVersion

private java.lang.String captureVersion

DOCUMENT ME!

channels
```
private java.lang.String[] channels
```
DOCUMENT ME!

dataSetFileName

private java.lang.String dataSetFileName

DOCUMENT ME!

exPhotonCnt
```
private java.lang.String[] exPhotonCnt
```
DOCUMENT ME!

filterExposureTimeX

private java.lang.String filterExposureTimeX

DOCUMENT ME!

filterFluorophoreX

private java.lang.String[] filterFluorophoreX

DOCUMENT ME!

history
```
private java.lang.String[] history
```
DOCUMENT ME!

labels
```
private java.lang.String[] labels
```
DOCUMENT ME!

lambdaEm
```
private java.lang.String[] lambdaEm
```
DOCUMENT ME!

lambdaEx
```
private java.lang.String[] lambdaEx
```
DOCUMENT ME!

mapchannel
```
private java.lang.String[] mapchannel
```
DOCUMENT ME!

numAperture
```
private java.lang.String[] numAperture
```
DOCUMENT ME!

pinholeRadius

private java.lang.String[] pinholeRadius

DOCUMENT ME!

plateChamberID

private java.lang.String plateChamberID

DOCUMENT ME!

plateVesselID
```
private java.lang.String plateVesselID
```
DOCUMENT ME!

probe
```
private java.lang.String[] probe
```
DOCUMENT ME!

refrInxLensMedium

private java.lang.String[] refrInxLensMedium

DOCUMENT ME!

refrInxMedium

private java.lang.String[] refrInxMedium

DOCUMENT ME!

scilType
```
private java.lang.String scilType
```
DOCUMENT ME!

sensorModel
```
private java.lang.String sensorModel
```
DOCUMENT ME!

sensorType
```
private java.lang.String sensorType
```
DOCUMENT ME!

specimen
```
private java.lang.String[] specimen
```
DOCUMENT ME!

specimenSpecies

private java.lang.String[] specimenSpecies

DOCUMENT ME!

version
```
private java.lang.String version
```
DOCUMENT ME!

Constructor Detail

FileInfoICS

public FileInfoICS(java.lang.String name,
                   java.lang.String directory,
                   int format)

File info storage constructor.

Parameters:: name - file name; directory - directory; format - file format

Method Detail
- displayAboutInfo
```
public void displayAboutInfo(JDialogBase dlog,
                             TransMatrix matrix)
```
  Displays the file information.
  
  Specified by:
  
  displayAboutInfo in class FileInfoBase
  
  Parameters:
  
  dlog - dialog box that is written to
  
  matrix - transformation matrix
- setCaptureVersion
```
public void setCaptureVersion(java.lang.String captureVersion)
```
  DOCUMENT ME!
  
  Parameters:
  
  captureVersion - DOCUMENT ME!
- setChannels
```
public void setChannels(java.lang.String[] channels)
```
  DOCUMENT ME!
  
  Parameters:
  
  channels - DOCUMENT ME!
- setDataSetFileName
```
public void setDataSetFileName(java.lang.String dataSetFileName)
```
  DOCUMENT ME!
  
  Parameters:
  
  dataSetFileName - DOCUMENT ME!
- setExPhotonCnt
```
public void setExPhotonCnt(java.lang.String[] exPhotonCnt)
```
  DOCUMENT ME!
  
  Parameters:
  
  exPhotonCnt - DOCUMENT ME!
- setFilterExposureTimeX
```
public void setFilterExposureTimeX(java.lang.String filterExposureTimeX)
```
  DOCUMENT ME!
  
  Parameters:
  
  filterExposureTimeX - DOCUMENT ME!
- setFilterFluorophoreX
```
public void setFilterFluorophoreX(java.lang.String[] filterFluorophoreX)
```
  DOCUMENT ME!
  
  Parameters:
  
  filterFluorophoreX - DOCUMENT ME!
- setHistory
```
public void setHistory(java.lang.String[] history)
```
  DOCUMENT ME!
  
  Parameters:
  
  history - DOCUMENT ME!
- setLabels
```
public void setLabels(java.lang.String[] labels)
```
  DOCUMENT ME!
  
  Parameters:
  
  labels - DOCUMENT ME!
- setLambdaEm
```
public void setLambdaEm(java.lang.String[] lambdaEm)
```
  DOCUMENT ME!
  
  Parameters:
  
  lambdaEm - DOCUMENT ME!
- setLambdaEx
```
public void setLambdaEx(java.lang.String[] lambdaEx)
```
  DOCUMENT ME!
  
  Parameters:
  
  lambdaEx - DOCUMENT ME!
- setMapchannel
```
public void setMapchannel(java.lang.String[] mapchannel)
```
  DOCUMENT ME!
  
  Parameters:
  
  mapchannel - DOCUMENT ME!
- setNumAperture
```
public void setNumAperture(java.lang.String[] numAperture)
```
  DOCUMENT ME!
  
  Parameters:
  
  numAperture - DOCUMENT ME!
- setPinholeRadius
```
public void setPinholeRadius(java.lang.String[] pinholeRadius)
```
  DOCUMENT ME!
  
  Parameters:
  
  pinholeRadius - DOCUMENT ME!
- setPlateChamberID
```
public void setPlateChamberID(java.lang.String plateChamberID)
```
  DOCUMENT ME!
  
  Parameters:
  
  plateChamberID - DOCUMENT ME!
- setPlateVesselID
```
public void setPlateVesselID(java.lang.String plateVesselID)
```
  DOCUMENT ME!
  
  Parameters:
  
  plateVesselID - DOCUMENT ME!
- setProbe
```
public void setProbe(java.lang.String[] probe)
```
  DOCUMENT ME!
  
  Parameters:
  
  probe - DOCUMENT ME!
- setRefrInxLensMedium
```
public void setRefrInxLensMedium(java.lang.String[] refrInxLensMedium)
```
  DOCUMENT ME!
  
  Parameters:
  
  refrInxLensMedium - DOCUMENT ME!
- setRefrInxMedium
```
public void setRefrInxMedium(java.lang.String[] refrInxMedium)
```
  DOCUMENT ME!
  
  Parameters:
  
  refrInxMedium - DOCUMENT ME!
- setScilType
```
public void setScilType(java.lang.String scilType)
```
  DOCUMENT ME!
  
  Parameters:
  
  scilType - DOCUMENT ME!
- setSensorModel
```
public void setSensorModel(java.lang.String sensorModel)
```
  DOCUMENT ME!
  
  Parameters:
  
  sensorModel - DOCUMENT ME!
- setSensorType
```
public void setSensorType(java.lang.String sensorType)
```
  DOCUMENT ME!
  
  Parameters:
  
  sensorType - DOCUMENT ME!
- setSpecimen
```
public void setSpecimen(java.lang.String[] specimen)
```
  DOCUMENT ME!
  
  Parameters:
  
  specimen - DOCUMENT ME!
- setSpecimenSpecies
```
public void setSpecimenSpecies(java.lang.String[] specimenSpecies)
```
  DOCUMENT ME!
  
  Parameters:
  
  specimenSpecies - DOCUMENT ME!
- setVersion
```
public void setVersion(java.lang.String version)
```
  DOCUMENT ME!
  
  Parameters:
  
  version - DOCUMENT ME!

Class FileInfoICS

Nested Class Summary

Nested classes/interfaces inherited from class gov.nih.mipav.model.file.FileInfoBase

Field Summary

Fields inherited from class gov.nih.mipav.model.file.FileInfoBase

Constructor Summary

Method Summary

Methods inherited from class gov.nih.mipav.model.file.FileInfoBase

Methods inherited from class gov.nih.mipav.model.structures.ModelSerialCloneable

Methods inherited from class java.lang.Object

Field Detail

serialVersionUID

captureVersion

channels

dataSetFileName

exPhotonCnt

filterExposureTimeX

filterFluorophoreX

history

labels

lambdaEm

lambdaEx

mapchannel

numAperture

pinholeRadius

plateChamberID

plateVesselID

probe

refrInxLensMedium

refrInxMedium

scilType

sensorModel

sensorType

specimen

specimenSpecies

version

Constructor Detail

FileInfoICS

Method Detail

displayAboutInfo

setCaptureVersion

setChannels

setDataSetFileName

setExPhotonCnt

setFilterExposureTimeX

setFilterFluorophoreX

setHistory

setLabels

setLambdaEm

setLambdaEx

setMapchannel

setNumAperture

setPinholeRadius

setPlateChamberID

setPlateVesselID

setProbe

setRefrInxLensMedium

setRefrInxMedium

setScilType

setSensorModel

setSensorType

setSpecimen

setSpecimenSpecies

setVersion