java.lang.Object
- java.lang.Thread
- - gov.nih.mipav.model.algorithms.AlgorithmBase
  - - gov.nih.mipav.model.algorithms.utilities.AlgorithmQuantifyMask

All Implemented Interfaces:

java.awt.event.ActionListener, java.awt.event.WindowListener, java.lang.Runnable, java.util.EventListener
```
public class AlgorithmQuantifyMask
extends AlgorithmBase
```
Algorithm that does basic calculations on Mask images (boolean/ubyte/short) calculates Center of Mass, area (in resolutions), and number of pixels per mask

- Nested Class Summary
  - Nested classes/interfaces inherited from class java.lang.Thread
    java.lang.Thread.State, java.lang.Thread.UncaughtExceptionHandler
- Field Summary
  - Fields inherited from class gov.nih.mipav.model.algorithms.AlgorithmBase
    destFlag, destImage, image25D, mask, maxProgressValue, minProgressValue, multiThreadingEnabled, nthreads, progress, progressModulus, progressStep, runningInSeparateThread, separable, srcImage, threadStopped
  - Fields inherited from class java.lang.Thread
    MAX_PRIORITY, MIN_PRIORITY, NORM_PRIORITY
- Constructor Summary
  
  Constructors
  Constructor Description
  
  AlgorithmQuantifyMask(ModelImage srcImg)
  Creates a new AlgorithmMask object.
- Method Summary
  
  All Methods Instance Methods Concrete Methods
  Modifier and Type Method Description
  
  private void calc2D()
  
  private void calc34D()
  
  void runAlgorithm()
  Actually runs the algorithm.
  - Methods inherited from class gov.nih.mipav.model.algorithms.AlgorithmBase
    actionPerformed, addListener, addProgressChangeListener, calculateImageSize, calculatePrincipleAxis, computeElapsedTime, computeElapsedTime, convertIntoFloat, delinkProgressToAlgorithm, delinkProgressToAlgorithmMulti, displayError, errorCleanUp, finalize, fireProgressStateChanged, fireProgressStateChanged, fireProgressStateChanged, fireProgressStateChanged, fireProgressStateChanged, generateProgressValues, getDestImage, getElapsedTime, getMask, getMaxProgressValue, getMinProgressValue, getNumberOfThreads, getProgress, getProgressChangeListener, getProgressChangeListeners, getProgressModulus, getProgressStep, getProgressValues, getSrcImage, isCompleted, isImage25D, isMultiThreadingEnabled, isRunningInSeparateThread, isThreadStopped, linkProgressToAlgorithm, linkProgressToAlgorithm, makeProgress, notifyListeners, removeListener, removeProgressChangeListener, run, setCompleted, setImage25D, setMask, setMaxProgressValue, setMinProgressValue, setMultiThreadingEnabled, setNumberOfThreads, setProgress, setProgressModulus, setProgressStep, setProgressValues, setProgressValues, setRunningInSeparateThread, setSrcImage, setStartTime, setThreadStopped, startMethod, windowActivated, windowClosed, windowClosing, windowDeactivated, windowDeiconified, windowIconified, windowOpened
  - Methods inherited from class java.lang.Thread
    activeCount, checkAccess, clone, countStackFrames, currentThread, dumpStack, enumerate, getAllStackTraces, getContextClassLoader, getDefaultUncaughtExceptionHandler, getId, getName, getPriority, getStackTrace, getState, getThreadGroup, getUncaughtExceptionHandler, holdsLock, interrupt, interrupted, isAlive, isDaemon, isInterrupted, join, join, join, onSpinWait, resume, setContextClassLoader, setDaemon, setDefaultUncaughtExceptionHandler, setName, setPriority, setUncaughtExceptionHandler, sleep, sleep, start, stop, suspend, toString, yield
  - Methods inherited from class java.lang.Object
    equals, getClass, hashCode, notify, notifyAll, wait, wait, wait

- Constructor Detail
  - AlgorithmQuantifyMask
```
public AlgorithmQuantifyMask(ModelImage srcImg)
```
    Creates a new AlgorithmMask object.
    
    Parameters:
    
    srcImg - source image model
- Method Detail
  - runAlgorithm
```
public void runAlgorithm()
```
    Description copied from class: AlgorithmBase
    
    Actually runs the algorithm. Implemented by inheriting algorithms.
    
    Specified by:
    
    runAlgorithm in class AlgorithmBase
  - calc2D
```
private void calc2D()
```
  - calc34D
```
private void calc34D()
```

Modifier and Type	Method	Description
`private void`	`calc2D()`
`private void`	`calc34D()`
`void`	`runAlgorithm()`	Actually runs the algorithm.

Class AlgorithmQuantifyMask

Nested Class Summary

Nested classes/interfaces inherited from class java.lang.Thread

Field Summary

Fields inherited from class gov.nih.mipav.model.algorithms.AlgorithmBase

Fields inherited from class java.lang.Thread

Constructor Summary

Method Summary

Methods inherited from class gov.nih.mipav.model.algorithms.AlgorithmBase

Methods inherited from class java.lang.Thread

Methods inherited from class java.lang.Object

Constructor Detail

AlgorithmQuantifyMask

Method Detail

runAlgorithm

calc2D

calc34D