java.lang.Object
- java.lang.Thread
- - gov.nih.mipav.model.algorithms.AlgorithmBase
  - - gov.nih.mipav.model.algorithms.utilities.AlgorithmInsertSlice

All Implemented Interfaces:

java.awt.event.ActionListener, java.awt.event.WindowListener, java.lang.Runnable, java.util.EventListener
```
public class AlgorithmInsertSlice
extends AlgorithmBase
```
Algorithm to insert a slice. Operates with sliceType either AVERAGE or BLANK or ORGIINAL. If AVERAGE, the inserted slice is set equal to the mean of the 2 surrounding slices unless it is an new start or end. A new start or end simply preserves the usual slice spacing. In BLANK mode a slice with all pixels zero is inserted. In original a 2D image of the same dimensions is inserted. Must insert black and white with black and white and color with color.

Nested Class Summary
- Nested classes/interfaces inherited from class java.lang.Thread
  java.lang.Thread.State, java.lang.Thread.UncaughtExceptionHandler

Field Summary

Fields
Modifier and Type	Field	Description
`static int`	`ADJACENT_DOWN`	Copy adjacent slice.
`static int`	`ADJACENT_UP`	Copy adjacent slice.
`static int`	`AVERAGE`	Average slice type - the inserted slice is set equal to the mean of the 2 surrounding slices.
`static int`	`BLANK`	Blank slice type - the inserted slice is blank.
`private ModelImage`	`insertedImage`	Image inserted for slice type == ORIGINAL.
`private int`	`insertSlice`	Number of slice before which another slice is inserted.
`private int`	`oldZdim`	Original Z dimension of the image.
`static int`	`ORIGINAL`	Original slice type - a 2D image is inserted.
`private int`	`sliceArea`	Area of a slice (Xdim * Ydim).
`private int`	`sliceType`	Insert an AVERAGE or BLANK image slice.
`static int`	`WEIGHTED_AVERAGE`	Weighted average slice type.
`private float`	`weightPrevious`	For weighted averaging.
`private int`	`Xdim`	X dimension of the image.
`private int`	`Ydim`	Y dimension of the image.

Fields inherited from class gov.nih.mipav.model.algorithms.AlgorithmBase
destFlag, destImage, image25D, mask, maxProgressValue, minProgressValue, multiThreadingEnabled, nthreads, progress, progressModulus, progressStep, runningInSeparateThread, separable, srcImage, threadStopped

Fields inherited from class java.lang.Thread
MAX_PRIORITY, MIN_PRIORITY, NORM_PRIORITY

Constructor Summary

Constructors
Constructor	Description
`AlgorithmInsertSlice(ModelImage srcImage, ModelImage destImage, int insertSlice, int sliceType, ModelImage insertedImage)`	Import source and destination images into the class.

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`void`	`finalize()`	Prepares this class for destruction.
`void`	`runAlgorithm()`	Runs algorithm.
`void`	`setWeightPrevious(float wp)`	DOCUMENT ME!

Methods inherited from class gov.nih.mipav.model.algorithms.AlgorithmBase
actionPerformed, addListener, addProgressChangeListener, calculateImageSize, calculatePrincipleAxis, computeElapsedTime, computeElapsedTime, convertIntoFloat, delinkProgressToAlgorithm, delinkProgressToAlgorithmMulti, displayError, errorCleanUp, fireProgressStateChanged, fireProgressStateChanged, fireProgressStateChanged, fireProgressStateChanged, fireProgressStateChanged, generateProgressValues, getDestImage, getElapsedTime, getMask, getMaxProgressValue, getMinProgressValue, getNumberOfThreads, getProgress, getProgressChangeListener, getProgressChangeListeners, getProgressModulus, getProgressStep, getProgressValues, getSrcImage, isCompleted, isImage25D, isMultiThreadingEnabled, isRunningInSeparateThread, isThreadStopped, linkProgressToAlgorithm, linkProgressToAlgorithm, makeProgress, notifyListeners, removeListener, removeProgressChangeListener, run, setCompleted, setImage25D, setMask, setMaxProgressValue, setMinProgressValue, setMultiThreadingEnabled, setNumberOfThreads, setProgress, setProgressModulus, setProgressStep, setProgressValues, setProgressValues, setRunningInSeparateThread, setSrcImage, setStartTime, setThreadStopped, startMethod, windowActivated, windowClosed, windowClosing, windowDeactivated, windowDeiconified, windowIconified, windowOpened

Methods inherited from class java.lang.Thread
activeCount, checkAccess, clone, countStackFrames, currentThread, dumpStack, enumerate, getAllStackTraces, getContextClassLoader, getDefaultUncaughtExceptionHandler, getId, getName, getPriority, getStackTrace, getState, getThreadGroup, getUncaughtExceptionHandler, holdsLock, interrupt, interrupted, isAlive, isDaemon, isInterrupted, join, join, join, onSpinWait, resume, setContextClassLoader, setDaemon, setDefaultUncaughtExceptionHandler, setName, setPriority, setUncaughtExceptionHandler, sleep, sleep, start, stop, suspend, toString, yield

Methods inherited from class java.lang.Object
equals, getClass, hashCode, notify, notifyAll, wait, wait, wait

- Field Detail
  - WEIGHTED_AVERAGE
```
public static final int WEIGHTED_AVERAGE
```
    Weighted average slice type.
    
    See Also:
    
    Constant Field Values
  - AVERAGE
```
public static final int AVERAGE
```
    Average slice type - the inserted slice is set equal to the mean of the 2 surrounding slices.
    
    See Also:
    
    Constant Field Values
  - BLANK
```
public static final int BLANK
```
    Blank slice type - the inserted slice is blank.
    
    See Also:
    
    Constant Field Values
  - ORIGINAL
```
public static final int ORIGINAL
```
    Original slice type - a 2D image is inserted.
    
    See Also:
    
    Constant Field Values
  - ADJACENT_DOWN
```
public static final int ADJACENT_DOWN
```
    Copy adjacent slice.
    
    See Also:
    
    Constant Field Values
  - ADJACENT_UP
```
public static final int ADJACENT_UP
```
    Copy adjacent slice.
    
    See Also:
    
    Constant Field Values
  - insertedImage
```
private ModelImage insertedImage
```
    Image inserted for slice type == ORIGINAL.
  - insertSlice
```
private int insertSlice
```
    Number of slice before which another slice is inserted.
  - oldZdim
```
private int oldZdim
```
    Original Z dimension of the image.
  - sliceArea
```
private int sliceArea
```
    Area of a slice (Xdim * Ydim).
  - sliceType
```
private int sliceType
```
    Insert an AVERAGE or BLANK image slice.
  - weightPrevious
```
private float weightPrevious
```
    For weighted averaging.
  - Xdim
```
private int Xdim
```
    X dimension of the image.
  - Ydim
```
private int Ydim
```
    Y dimension of the image.
- Constructor Detail
  - AlgorithmInsertSlice
```
public AlgorithmInsertSlice(ModelImage srcImage,
                            ModelImage destImage,
                            int insertSlice,
                            int sliceType,
                            ModelImage insertedImage)
```
    Import source and destination images into the class.
    
    Parameters:
    
    srcImage - source image (image to clip from)
    
    destImage - destination image (image to paste to)
    
    insertSlice - number of slice before which another slice is inserted
    
    sliceType - AVERAGE or BLANK or ORIGINAL
    
    insertedImage - image inserted for sliceType == ORIGINAL
- Method Detail
  - finalize
```
public void finalize()
```
    Prepares this class for destruction.
    
    Overrides:
    
    finalize in class AlgorithmBase
  - runAlgorithm
```
public void runAlgorithm()
```
    Runs algorithm.
    
    Specified by:
    
    runAlgorithm in class AlgorithmBase
  - setWeightPrevious
```
public void setWeightPrevious(float wp)
```
    DOCUMENT ME!
    
    Parameters:
    
    wp - DOCUMENT ME!

Class AlgorithmInsertSlice

Nested Class Summary

Nested classes/interfaces inherited from class java.lang.Thread

Field Summary

Fields inherited from class gov.nih.mipav.model.algorithms.AlgorithmBase

Fields inherited from class java.lang.Thread

Constructor Summary

Method Summary

Methods inherited from class gov.nih.mipav.model.algorithms.AlgorithmBase

Methods inherited from class java.lang.Thread

Methods inherited from class java.lang.Object

Field Detail

WEIGHTED_AVERAGE

AVERAGE

BLANK

ORIGINAL

ADJACENT_DOWN

ADJACENT_UP

insertedImage

insertSlice

oldZdim

sliceArea

sliceType

weightPrevious

Xdim

Ydim

Constructor Detail

AlgorithmInsertSlice

Method Detail

finalize

runAlgorithm

setWeightPrevious