java.lang.Object
- java.lang.Thread
- - gov.nih.mipav.model.algorithms.AlgorithmBase
  - - gov.nih.mipav.model.algorithms.AlgorithmPointArea

All Implemented Interfaces:

java.awt.event.ActionListener, java.awt.event.WindowListener, java.lang.Runnable, java.util.EventListener
```
public class AlgorithmPointArea
extends AlgorithmBase
```
DOCUMENT ME!

Nested Class Summary
- Nested classes/interfaces inherited from class java.lang.Thread
  java.lang.Thread.State, java.lang.Thread.UncaughtExceptionHandler

Field Summary

Fields
Modifier and Type	Field	Description
`private float[]`	`averageIntensities`	DOCUMENT ME!
`private boolean`	`doColor`	DOCUMENT ME!
`private ModelImage`	`image`	source image.
`private boolean`	`leftSpace`	if x is an even number, use the extra space on left half (otherwise right).
`private float[][]`	`rgbAverageIntensities`	DOCUMENT ME!
`private float`	`threshold`	DOCUMENT ME!
`private boolean`	`topSpace`	if y is an even number, use the extra space on the top half (otherwise bottom).
`private boolean`	`useThreshold`	DOCUMENT ME!
`private int`	`xLocation`	x value of the origin.
`private int`	`xSpace`	number of pixels in x direction.
`private int`	`yLocation`	y value of the origin.
`private int`	`ySpace`	number of pixels in y direction.

Fields inherited from class gov.nih.mipav.model.algorithms.AlgorithmBase
destFlag, destImage, image25D, mask, maxProgressValue, minProgressValue, multiThreadingEnabled, nthreads, progress, progressModulus, progressStep, runningInSeparateThread, separable, srcImage, threadStopped

Fields inherited from class java.lang.Thread
MAX_PRIORITY, MIN_PRIORITY, NORM_PRIORITY

Constructor Summary

Constructors
Constructor	Description
`AlgorithmPointArea(ModelImage srcImage, int xLoc, int yLoc, int xSpace, int ySpace, boolean leftSpace, boolean topSpace, boolean useThreshold, float threshold)`	Creates a new AlgorithmPointArea object.

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`void`	`disposeLocal()`	DOCUMENT ME!
`float[]`	`getAverageIntensities()`	DOCUMENT ME!
`float[][]`	`getRGBAverageIntensities()`	DOCUMENT ME!
`void`	`runAlgorithm()`	DOCUMENT ME!

Methods inherited from class gov.nih.mipav.model.algorithms.AlgorithmBase
actionPerformed, addListener, addProgressChangeListener, calculateImageSize, calculatePrincipleAxis, computeElapsedTime, computeElapsedTime, convertIntoFloat, delinkProgressToAlgorithm, delinkProgressToAlgorithmMulti, displayError, errorCleanUp, finalize, fireProgressStateChanged, fireProgressStateChanged, fireProgressStateChanged, fireProgressStateChanged, fireProgressStateChanged, generateProgressValues, getDestImage, getElapsedTime, getMask, getMaxProgressValue, getMinProgressValue, getNumberOfThreads, getProgress, getProgressChangeListener, getProgressChangeListeners, getProgressModulus, getProgressStep, getProgressValues, getSrcImage, isCompleted, isImage25D, isMultiThreadingEnabled, isRunningInSeparateThread, isThreadStopped, linkProgressToAlgorithm, linkProgressToAlgorithm, makeProgress, notifyListeners, removeListener, removeProgressChangeListener, run, setCompleted, setImage25D, setMask, setMaxProgressValue, setMinProgressValue, setMultiThreadingEnabled, setNumberOfThreads, setProgress, setProgressModulus, setProgressStep, setProgressValues, setProgressValues, setRunningInSeparateThread, setSrcImage, setStartTime, setThreadStopped, startMethod, windowActivated, windowClosed, windowClosing, windowDeactivated, windowDeiconified, windowIconified, windowOpened

Methods inherited from class java.lang.Thread
activeCount, checkAccess, clone, countStackFrames, currentThread, dumpStack, enumerate, getAllStackTraces, getContextClassLoader, getDefaultUncaughtExceptionHandler, getId, getName, getPriority, getStackTrace, getState, getThreadGroup, getUncaughtExceptionHandler, holdsLock, interrupt, interrupted, isAlive, isDaemon, isInterrupted, join, join, join, onSpinWait, resume, setContextClassLoader, setDaemon, setDefaultUncaughtExceptionHandler, setName, setPriority, setUncaughtExceptionHandler, sleep, sleep, start, stop, suspend, toString, yield

Methods inherited from class java.lang.Object
equals, getClass, hashCode, notify, notifyAll, wait, wait, wait

- Field Detail
  - averageIntensities
```
private float[] averageIntensities
```
    DOCUMENT ME!
  - doColor
```
private boolean doColor
```
    DOCUMENT ME!
  - image
```
private ModelImage image
```
    source image.
  - leftSpace
```
private boolean leftSpace
```
    if x is an even number, use the extra space on left half (otherwise right).
  - rgbAverageIntensities
```
private float[][] rgbAverageIntensities
```
    DOCUMENT ME!
  - threshold
```
private float threshold
```
    DOCUMENT ME!
  - topSpace
```
private boolean topSpace
```
    if y is an even number, use the extra space on the top half (otherwise bottom).
  - useThreshold
```
private boolean useThreshold
```
    DOCUMENT ME!
  - xLocation
```
private int xLocation
```
    x value of the origin.
  - xSpace
```
private int xSpace
```
    number of pixels in x direction.
  - yLocation
```
private int yLocation
```
    y value of the origin.
  - ySpace
```
private int ySpace
```
    number of pixels in y direction.
- Constructor Detail
  - AlgorithmPointArea
```
public AlgorithmPointArea(ModelImage srcImage,
                          int xLoc,
                          int yLoc,
                          int xSpace,
                          int ySpace,
                          boolean leftSpace,
                          boolean topSpace,
                          boolean useThreshold,
                          float threshold)
```
    Creates a new AlgorithmPointArea object.
    
    Parameters:
    
    srcImage - DOCUMENT ME!
    
    xLoc - DOCUMENT ME!
    
    yLoc - DOCUMENT ME!
    
    xSpace - DOCUMENT ME!
    
    ySpace - DOCUMENT ME!
    
    leftSpace - DOCUMENT ME!
    
    topSpace - DOCUMENT ME!
    
    useThreshold - DOCUMENT ME!
    
    threshold - DOCUMENT ME!
- Method Detail
  - disposeLocal
```
public void disposeLocal()
```
    DOCUMENT ME!
  - getAverageIntensities
```
public float[] getAverageIntensities()
```
    DOCUMENT ME!
    
    Returns:
    
    DOCUMENT ME!
  - getRGBAverageIntensities
```
public float[][] getRGBAverageIntensities()
```
    DOCUMENT ME!
    
    Returns:
    
    DOCUMENT ME!
  - runAlgorithm
```
public void runAlgorithm()
```
    DOCUMENT ME!
    
    Specified by:
    
    runAlgorithm in class AlgorithmBase

Class AlgorithmPointArea

Nested Class Summary

Nested classes/interfaces inherited from class java.lang.Thread

Field Summary

Fields inherited from class gov.nih.mipav.model.algorithms.AlgorithmBase

Fields inherited from class java.lang.Thread

Constructor Summary

Method Summary

Methods inherited from class gov.nih.mipav.model.algorithms.AlgorithmBase

Methods inherited from class java.lang.Thread

Methods inherited from class java.lang.Object

Field Detail

averageIntensities

doColor

image

leftSpace

rgbAverageIntensities

threshold

topSpace

useThreshold

xLocation

xSpace

yLocation

ySpace

Constructor Detail

AlgorithmPointArea

Method Detail

disposeLocal

getAverageIntensities

getRGBAverageIntensities

runAlgorithm